Gene Shel_18680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18680 
Symbol 
ID8395757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2096044 
End bp2097501 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content56% 
IMG OID644986619 
ProductCotH protein 
Protein accessionYP_003144233 
Protein GI257064561 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5337] Spore coat assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.237965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.166703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAT CAACCCTGAA GCTATCCAGT CGTCAAGCCT TTCTTTTGGC GACAGCGTTC 
CTGGTTGTTT GCCTGCTGGT TTTCACCGGC TGTCACTCCG CCGATAAAGA CGAGGACGGC
GGGGCAGAGG CCTCCGCCTA CGCGAGCCTC ATATTCGATG GCACCCGCGT CCATACCGTC
GACATCGAAA TGACGGAAGA GGACAGGACC AACCAGCCTT CGAATCCGAA GGAGAAGACC
AAATACAAGG TGACCGCGGT GATCGATGGG GAAGAAGTCG AAGACGTCGC CTTCAGCACG
AAGGGCAATT CCAGCCTGTT CTTCGTGGCG GATGCCGGCA AGGACAAATT CAGTTACGGG
ATCGATTTCG GAAAGTACGT GGACGGTCAG ACCTATCACG GCTTGGACAA GCTGAACCTT
CAGAACAACT TCACGGACGG GTCTGCGATG AAGGAGCACA TGGCATACTG GCTGTTCGAC
AGAATGGGCG TGGATGCGCC GTTGACGTCA TACGTGTGGC TGACGGTAAA CGGTGAGGTC
CAGGGGCTTT ACACCGCTGT CGAGGGAGTC GAAGAGAGCT TCCTCGAGAG AACGCAAGAC
GGGGAAGGGG CGCTTTACAA ACCCGAAGAC GGCGACATGG CCCTGACCGA TGAGGAAATG
AAGCGGATCC AAAACGGAGA AAGCGCGGCC CATAACAACG GGGGCGGCGC GGATCTGGCA
TACAAGGACG ACAACGAAGA GAGCTACCCC GACATCTTTG AGAATGCGGA AACCCCCGAC
GACGCGGAAA CGCGTGAGCG GATAATAATG GCGCTGAAGG CTCTCTCCGA GGGAGAAGAG
TTGGAGCAAC ACCTGAATAC GGAAGAGATC ATAAGATACT TCGCAGTCCA TAACTTTCTG
GTGTCCTATG ACAGCTATAC GGGACCGATG CTCCACAACT ATCTGCTGTA TGAAAAAGAC
GGCAGGCTCG CTCTGTTGCC ATGGGACTAT GACATAGCGT TCGGCAGCTT CCCGGCGGAT
GCGCAGGTGG GCCAGAAAAT AGACAGCGGC GCCGTCGTCA ACGCGGGCAT CGATTCCCCG
TTGGGAATCG TTCCCGATGA AGAACGCCCG ATGTGGAACT GGATACTGTC CGACGAACGG
TATCTCGCGG AGTATCATGA CGCGCTTTCG GACGTGACGG ATATCATTGA TTCCGGAGAT
TTCAAAGCGG AATCGGAAAG GGTCCACGCG CTCATAGCTC CCTATATCGA AGAGGATCCG
AAAGCATTCT TCTCGCCGGA AAAACACGAT ACGGCCTATC AGACGCTCCT GATGTTCACG
GAGCTGAGGG CGGAAAGCAT AACGAAGCAA CTGGATGGCA AGCTCGCGAC CAGGTCGGAT
TCGCAGGACG ATGCGGACAA GGTGGATGCT TCCGATATGT CCATCGAGGA CATGGGGTCC
GACCGGGATC TGCAATGA
 
Protein sequence
MKESTLKLSS RQAFLLATAF LVVCLLVFTG CHSADKDEDG GAEASAYASL IFDGTRVHTV 
DIEMTEEDRT NQPSNPKEKT KYKVTAVIDG EEVEDVAFST KGNSSLFFVA DAGKDKFSYG
IDFGKYVDGQ TYHGLDKLNL QNNFTDGSAM KEHMAYWLFD RMGVDAPLTS YVWLTVNGEV
QGLYTAVEGV EESFLERTQD GEGALYKPED GDMALTDEEM KRIQNGESAA HNNGGGADLA
YKDDNEESYP DIFENAETPD DAETRERIIM ALKALSEGEE LEQHLNTEEI IRYFAVHNFL
VSYDSYTGPM LHNYLLYEKD GRLALLPWDY DIAFGSFPAD AQVGQKIDSG AVVNAGIDSP
LGIVPDEERP MWNWILSDER YLAEYHDALS DVTDIIDSGD FKAESERVHA LIAPYIEEDP
KAFFSPEKHD TAYQTLLMFT ELRAESITKQ LDGKLATRSD SQDDADKVDA SDMSIEDMGS
DRDLQ