Gene Shel_18640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18640 
Symbol 
ID8395753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2087707 
End bp2092905 
Gene Length5199 bp 
Protein Length1732 aa 
Translation table11 
GC content63% 
IMG OID644986615 
Productcalcineurin-like phosphoesterase 
Protein accessionYP_003144229 
Protein GI257064557 
COG category[R] General function prediction only 
COG ID[COG5263] FOG: Glucan-binding domain (YG repeat) 
TIGRFAM ID[TIGR02543] Listeria/Bacterioides repeat 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.993356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCGCCA TAGCTTTGGC GTTCATGATA GGCGGGGCTT CCCTCCTCGT GCCGAACGCC 
ATGAGCAAGG CTTACGCAGA CGAATCCGGC ACGAGCGTGC TGGCATTCAC GTCGGACATC
CACAACTCAT CCGACGACAC GGCCAAGAAC CGCCTCAACA CCTGGCTCAC CAACGTCGGG
GATAAGGCGG GCATCAGCAA GAGCGACATC GAGCTCTTCG GCTTCTGCGG CGACATGGGC
AGCGCCTCGG CCAACGAGAG CCAGTTCTGG ACCTACACGC AATCGGTCAT GACCGCGGTC
GATCAGAACG GCATAACAGG CGTCTACACC ACCGGCAACC ACGAATTCTA CAACGGCAAG
TACAACACCA CCACCAACTC CGTCAAGAAC AACTTCATAA AAGACGGCGA GGCGATGGTG
GGCAGCAACT ACCGCATCTA CTGCCTGGGT ACGGACAACT GGAACAACAA CAGCGACAAT
TACACCGCCG CACAGATATC GGCGCTCCAG AACTACCTGG CAGGCATCGA CAACGACAAG
GTCGTCATCA TCCTGACGCA CTTCCCCCTG CACCATTGGG GAAGCAGCGG CTATTGGGGA
GGCCGCACGA CGGCCAATGC CGATGGCGTC ATCGACGTCC TGAACGCCGC CACGGCATCC
GGAAAGAAGA TCGTCCTGCT GTGGGGTCAC AACCACTCCC AGAGCGACAC CAACTACGAC
GAGGTTTTCG AGCCTGGATC CGTAATCCAA TGGGGCAGCT CCAGCAGCGA CACGAAGGAA
TTCAACTTCT ACTACGCCGC CGCTGGCTGC ATGAGCGGCA AGGAATATGG CTCTGGTAGC
GAAAGCGTCA AGGGCAAAGC CCTCCTCCTC ACAATCAACC ACAAGAACCA GCTGTCGTTC
GCGTACTACG ACGAATTCGC CAACAACGTA ACGGAGAACG GCACCGACGG ACAGGGAACC
GCATTCACCG AGCAGGATCC CGTAGCCGTG ACGGGCGTCT CCATCAACCA GACCTCCGCT
AGCGTTGAGG TGGGCAAGAC CACCAAGCTC ACCGCCACGG TCGAGCCGGC GGACGCCACC
AATAAGGCCG TATCCTGGGC AAGCAGCGAC ACCTCCATCG CGACGGTCAG CTCCGACGGC
AGGGTCAGAG GCGTCGCTCA AGGCACCGCC ACAATCACCG TGACGGCGGG CGACACCGAT
ACCAGTGCGA TCTTCACCGA CGGCATCGAA GTCACGGTAA CTCCCCGCAG CTCCGTGGAG
CAGTACTTCG TCATCACGAT CGACAATTAC GCCCTGACCT CCAACCCGTC GTCTGAGATG
ACGTCCAACA GCTCCGGCTA CGAGTACCAC GGCCTTGAGG CAATCACGTA CAATGCGAAC
GATGCCGCTC CCTGGTCGAC TCTCTGGACT CTTGAGGAAG TGGACGGCGT CGAGAACGGG
TACTACATTA AGAGCTATAA CGGCGACTAC CTGAGCGCGA CCTACGTGAG GGGCAGCGGA
AGCGGCTACA CCGGCACGCT CACCGTCGGC GACACCCAGG ATGTCTGGGT CGTCGATGGC
GGCCTGGAGG CCTGGCAGGG CAACGGAAGC TACCTGAAGA GCACCAACGC CAGCGACAAC
CCCAGACCCG CCGACATCTA CCTAACCACC AGGGCGTCCA ACAACAGCGT CGACTTCTTC
ACGGTCGGCT CCTCCAGCAA CTACAAGACC AGCAAGCTGG TCGAGCCCGA TGCCACCGTT
GAACCCGTGG CTGTCACGGG CGTCGAAGTG GAGCCCGCCA CCCTCGAAAT CGAGGCAGGC
AAGTCCATCG CCCTGACCGC CAACGTGCTG CCCGCTGAGG CGGACGACAA GACCGTCACC
TGGACGAGCA GCGACGAATC CGTCGCGACG GTAAGCAACT CCGGCCGCGT CAAGGGCGTC
TCCGTCGGCC CCGCCACCAT CACCGCCACC ACCAACGACG GCGGATACAC CGGCACCTGC
GAGGTGACGG TCACCCCGAG CTCCGCGCCC GGAATCGGCT ACATCATCAC CATCGGCGAC
TATGCGCTGT CGGCCGAGCC GTCTTCCGAC GTTCTCGTCA ACAGCACGAA CTACCGCTAC
GAGGGCCTGA CCGGCGTCCT GTATGACGGC AACACCGAGC CCACCAGCGA AATCCTCTGG
CTCATCGAGC CCACCGAAGG CGGCTACTAC ATCAAAAGCC AGGACGGCCA GTACCTGAAC
GCCGTCTCCG GCAGCACGCT GCACAGCGCC AACGCCGACA AGTACATAAC CCACGAGGAA
GGGTCCGCCT CCGCCTCGCT GAACCTGTTC ACCGTCAGGT CCACCGGCGA GTCCAGCACG
ATGATCGACC CCGGCAACCA GGCTGAGGTT CGCTACATCG AGACCGACGC CCTCTCCACC
GGCAAGGACT ACATCGTCGG TGTGACCAAG GATGGCGCCA GCGTTTACGC CATTGAAAAC
GTCGGCGGCT CCTCCTCCGC AGACACCGGC ACCGTCACAT TTGGCGAGGG CGAATACGTC
GCCGCGAGCG GCGACGAGCC CGCTTACATC GTCACCAACA ACACCAGCGC CGTCTGGAAC
TACAACTCCA GCAGGTACCT GACCAACAAC AGCAGGTACC TGTCCAGGAG CAGCAGTAGC
CCCTACGTGC CCCGCTCCAG CAGCAGGGGT AGCGCCGTCA CCTACGACAA TTCCAATCAG
CGCCTCTCCA TGTCTTATAG CAACAGTACC TACTACCTGA CCAACAGCAA CGGCACCTTC
GGCCTCAACA CGTCGGGCTC CAGCGCCGCC CAAGTCCGCA TCTTCGAAAG GTCGACCGTC
TTCAACTTCA AGTACATCGT GCAGTTCACC ACCGCCGGCG TGAACTACCA GTCGGGCAAG
TATGCGGCAG GCGAGATTCC CGTCTACAGC GGCGCCACCC CGACGAGAGC CGATTCCGAG
CAGTATTCCT ACACGTTCAT CGGATGGTCC TCCGACGGCG GCCAGATCGT CTATGGCCCG
AACGACGCCC TTCCTGCAGT CACCGGCCCC GTGACGTACG TTGCGCAGTT CGAGGCCGTG
CCGCTTCAGA ACAACTTCCT CATCACCTTC GTGGACTACG ATGGCGCCGA GCTGCAGAGC
TCCGAGTTCC CCCGCGGCGA GATGCCCGAG TACGCCGGCA CTACGCCGAC CAGGGCAGCT
GACGCAGACT ACATCTACAC GTTCTCTGGG TGGACCCCCG CCCCCGCAGA GGTAATCGGC
GAAGCAACCT ACACGGCTAC CTACGACCAG ACCCCGCGCA CCTACGGCGA GCCCACATGG
ACGTGGGCCA GCGATGACGA GAACGGCTAC ACCGCCGCCA CCGCCACTTT CGCCACCAAA
GACGGCGAGG CCGAGTTCAC CAAGGACGTC ACCGACAGCG AGCTCGAAAC GACAACCACC
TCGGCAACTT GCACCGATGA TGGGTCGACG GTCTATACCG CCACCGTAGA GTTCGGCGAC
CAGTCGTACA CCGCCACCCA GGAGGTCGTT ATCCCGGCCA CCGGCCACAC CCCCGTCACC
GACGAGGCCG TCCCGGCCAC CTGCACCGAG GACGGGCTGA CCGAGGGCAG CCACTGCTCC
GTCTGCGGCG AGGTCCTCGT GGCCCAGGAG CCCGTCCCGG CCACGGGCCA CGACTACCAG
GCCACCGTGA CCGAGCCCAC CTGCACCGAG GGCGGGTACA CGACCCACAC CTGCAGCCGC
TGCGGCGACA GCTACACCGA TTCCGAGACC GAGGCCCTCG GCCACGACCT GGTCCACCAC
GACGCGAAGG CCGCGACGTG CACCGAGCCC GGCTGGGAGG CCTACGACGA GTGCAGCCGC
TGCGACTACA CGACCTACAC CGAGATCCCG GCCACCGGCC ACACGCCCGT CACCGACGAG
GCCGTCCCTG CCACCTGCAC CGAGGACGGG CTGACCGAGG GCAGCCACTG CTCCGTCTGC
GGCGAGGTCC TCGTGGCCCA GGAGCCCGTC CCGGCCACGG GCCACGACTG GGGCGAGCCC
ACGTGGGAGT GGACCGGCAG CGACGAGGCG GGCTACACCG AAGCGACCGC CACGTTCACC
TGCGCCAACG ACCCGACCCA CACGATCACG GCAACCGATT CCGAGATCGA CGTCGTCGTC
GTTGACGCCA CCCCGGAAAC CAACGGCAGC AAGACCTTCA CCGCATCCGT CACCGGCCCG
GACGACGAGA CCTACGAGGG CACCAAGGTG GTCACCATCC CCGCAACGGG GTACACGTGG
AAGGCCCCCG TATACGAATG GGCCGAGACC GAGGACGGCC TCTCCTGCTC CGCCCTCATG
GAATGCAACG AGGATCCCGA CAAGAACATC GCCGAGACCG TCGACGCGAC CTACGCCGTG
ACCGAGCCCG CAACCTGCGT GGCCGCGGGG ACCGGCACGT ACACGGCCAC GTTCTCCAAC
ACCGCCTTCG AGGAGCAGAC CCAGGAGGTC GTTATCCCGG CCACGGGCCA CACGCCCGTC
ACCGACGAGG CCGTCCCTGC CACCTGCACC GAGGACGGGC TGACCGAGGG CAGCCACTGC
TCCGTCTGCG GCGAGGTCCT CGTGGCCCAG GAGCCCGTCC CGGCCCTCGG CCACGACTGG
GACGAGGGCA AGGTTACCGT GGAGCCCACG GCAACCTCCG AAGGCGAGAT GACCTACACC
TGCAAGAGGT GCGGCGAGAC CAAGACCGAG CCCATCGACA AGCTCGCACC CACCAAGAAC
GGCTGGGTCA AAGAGAATGG CAGCTGGAAG TACTACTCCG CCGGCAACGC CGTCAACGGG
TGGCAGAAGC TCCCCAACGG CAAGTGGTAC CACTTCACCA ACAACGTCAT GGACCACGGC
TGGTTCAAGG AGACGAACGG GAAGTACGCG GGCAAATGGT TCTACCTGGG CACCCCCGGA
GACAGCAACA CCGGCTGCAT GATTACGGGC TGGCTGAAGG TCAACGGATA TTGGTACTAC
CTCAAGCCTG GAACCGGCCA GATGACGACC GGCTGGCAGA AGGTAGACGG CTACTGGTAC
TACCTGAATC CGACAACCGG CAAGATGCTG ACCGGCTGGC AGAAGGTAGA CGGCTTTTGG
TACTACCTCA AGGACGGCTC CGGGCGCATG GTAACCGGCG ATTACCAGAT CAACGGCAAA
TGGTACACGT TCGCCAGCAG CGGAAGGCTC ATCTCCTAG
 
Protein sequence
MFAIALAFMI GGASLLVPNA MSKAYADESG TSVLAFTSDI HNSSDDTAKN RLNTWLTNVG 
DKAGISKSDI ELFGFCGDMG SASANESQFW TYTQSVMTAV DQNGITGVYT TGNHEFYNGK
YNTTTNSVKN NFIKDGEAMV GSNYRIYCLG TDNWNNNSDN YTAAQISALQ NYLAGIDNDK
VVIILTHFPL HHWGSSGYWG GRTTANADGV IDVLNAATAS GKKIVLLWGH NHSQSDTNYD
EVFEPGSVIQ WGSSSSDTKE FNFYYAAAGC MSGKEYGSGS ESVKGKALLL TINHKNQLSF
AYYDEFANNV TENGTDGQGT AFTEQDPVAV TGVSINQTSA SVEVGKTTKL TATVEPADAT
NKAVSWASSD TSIATVSSDG RVRGVAQGTA TITVTAGDTD TSAIFTDGIE VTVTPRSSVE
QYFVITIDNY ALTSNPSSEM TSNSSGYEYH GLEAITYNAN DAAPWSTLWT LEEVDGVENG
YYIKSYNGDY LSATYVRGSG SGYTGTLTVG DTQDVWVVDG GLEAWQGNGS YLKSTNASDN
PRPADIYLTT RASNNSVDFF TVGSSSNYKT SKLVEPDATV EPVAVTGVEV EPATLEIEAG
KSIALTANVL PAEADDKTVT WTSSDESVAT VSNSGRVKGV SVGPATITAT TNDGGYTGTC
EVTVTPSSAP GIGYIITIGD YALSAEPSSD VLVNSTNYRY EGLTGVLYDG NTEPTSEILW
LIEPTEGGYY IKSQDGQYLN AVSGSTLHSA NADKYITHEE GSASASLNLF TVRSTGESST
MIDPGNQAEV RYIETDALST GKDYIVGVTK DGASVYAIEN VGGSSSADTG TVTFGEGEYV
AASGDEPAYI VTNNTSAVWN YNSSRYLTNN SRYLSRSSSS PYVPRSSSRG SAVTYDNSNQ
RLSMSYSNST YYLTNSNGTF GLNTSGSSAA QVRIFERSTV FNFKYIVQFT TAGVNYQSGK
YAAGEIPVYS GATPTRADSE QYSYTFIGWS SDGGQIVYGP NDALPAVTGP VTYVAQFEAV
PLQNNFLITF VDYDGAELQS SEFPRGEMPE YAGTTPTRAA DADYIYTFSG WTPAPAEVIG
EATYTATYDQ TPRTYGEPTW TWASDDENGY TAATATFATK DGEAEFTKDV TDSELETTTT
SATCTDDGST VYTATVEFGD QSYTATQEVV IPATGHTPVT DEAVPATCTE DGLTEGSHCS
VCGEVLVAQE PVPATGHDYQ ATVTEPTCTE GGYTTHTCSR CGDSYTDSET EALGHDLVHH
DAKAATCTEP GWEAYDECSR CDYTTYTEIP ATGHTPVTDE AVPATCTEDG LTEGSHCSVC
GEVLVAQEPV PATGHDWGEP TWEWTGSDEA GYTEATATFT CANDPTHTIT ATDSEIDVVV
VDATPETNGS KTFTASVTGP DDETYEGTKV VTIPATGYTW KAPVYEWAET EDGLSCSALM
ECNEDPDKNI AETVDATYAV TEPATCVAAG TGTYTATFSN TAFEEQTQEV VIPATGHTPV
TDEAVPATCT EDGLTEGSHC SVCGEVLVAQ EPVPALGHDW DEGKVTVEPT ATSEGEMTYT
CKRCGETKTE PIDKLAPTKN GWVKENGSWK YYSAGNAVNG WQKLPNGKWY HFTNNVMDHG
WFKETNGKYA GKWFYLGTPG DSNTGCMITG WLKVNGYWYY LKPGTGQMTT GWQKVDGYWY
YLNPTTGKML TGWQKVDGFW YYLKDGSGRM VTGDYQINGK WYTFASSGRL IS