| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17400 |
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| Symbol | |
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| ID | 8395630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1966125 |
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| End bp | 1967591 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986494 |
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| Product | Na+ antiporter NhaC |
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| Protein accession | YP_003144108 |
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| Protein GI | 257064436 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.694784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAG AAACCGCGAG CAGTCGCAGG CAGCCCAGTG CTGCCGTGGC GGTCGTCTCG
TTCTTGGCGA TCGTCGCGGT TCTGGTTGTG CTGATCAACC TGAACGTCGA CACCACGATG
TCGCTGTTCG TAGCAACCAT CATGGCGGCG CTTGTTGCCT TTGCGCTGAA GATCCCTTGG
AAAGAAACCG AAAGCGTGCT GCTCAAGACA GTCGCAGACT GCATTCCGAC GTTCATCATC
GTCATCATGG TCGGCATGCT TGTGGGTATC TGGATTGCAG GCGGAACCGT TCCCGCTCTG
ATGTATTACG GCATGAAAAT CGTGTCGCCT TCAATCCTGG TACCGCTGGC ATTCATCCTG
TGCTTCCTGA CCTCTGAGTT CACCGGAACG TCCTTCGGTT CCATCGCCAC CATGGGCGTG
GCCTTCGTCG GCATCGCCTC GACCACCAAC ATCCCCATGG CCCTGGTCAT CGGCGCAGTG
GTCTGCGGTG CCTGGTTCGG TGACCGCATG TCCCCCATGT CCGACACCAC CAACCTGGCC
TCCGGCGTCT CCCGTGTGCC GCTGTACACG CACATCAACT CCATGCTGTA CTCTGCCGTG
CCGGCTGCCG TGATCGCGTT CGTGATGTTC GCCATCGCCG GCATCGCCAT GGGCGGCGGT
CACACCGACC CCGAAAGCCA GCAGATCATC ATGAATGCTC TGACCGAAAA CTACAACATG
AGCATCTGGC TCGTCCTTCC CGCCCTCATG GTGCTGGTCG TCTCCGCGCT GCGCATGCCT
GCGTTCCTCG GCTTCGGACT GACCATCATC GTGTCCGTCA TCTTCGCGAT GCTCACCCAG
GGCGTCGGCT TCGTCGACAT CATGAACTAC GCGGCTAACG GATTCTCCAT CGAAACCGGC
GCAGGCCCCA TGGTCGACAA CATGCTCAAC CGCGGCGGCA TCTCCTCGAT GACCGTCCTC
CTGGTCACGT TCATGGTCGC CTCCCTCATG GGCGGCATCA TCAAGGCAAC GGGCATCCTG
GAAGTCATCG CCAACGAGGT CCTGCTGAAG GTCATCAAGG GCAAGACCGC CCTGGTCGTC
GTCACGCTCA TCTACGGTTA CGTGGTGAAC TTCCTGGCCG CCGGCGGTCA GACCGTCTCC
ATCATCGTGA CGCAGCAGAC CTTCGAAGAG GCCTACGAGC GCCTCAACGT CGACCGCCGC
GTGCTGTCGC GCTGCCTCGA GGACTCCGCA ACCCTGTCCG CACCTATCGT TCCGTGGGGC
GTCGCCACGC TGTTCGTCAT GGCCACCCTG GGCTGCGGTC TGGAATACAT CCCGTACTGC
TGGTTCATCT TCCTGGTGCC GATCGCCGCA GTCGTCTGCG CCGCCACCAA CATCGGCATG
TGGGATGCCG ACGGCAACCG CATGTGGGGC AAGTACAAGG GCATGAAGGG CGCTCCCGGC
AAAGAGCCTG CCCAGCCTGT GAAGTAG
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| Protein sequence | MAEETASSRR QPSAAVAVVS FLAIVAVLVV LINLNVDTTM SLFVATIMAA LVAFALKIPW
KETESVLLKT VADCIPTFII VIMVGMLVGI WIAGGTVPAL MYYGMKIVSP SILVPLAFIL
CFLTSEFTGT SFGSIATMGV AFVGIASTTN IPMALVIGAV VCGAWFGDRM SPMSDTTNLA
SGVSRVPLYT HINSMLYSAV PAAVIAFVMF AIAGIAMGGG HTDPESQQII MNALTENYNM
SIWLVLPALM VLVVSALRMP AFLGFGLTII VSVIFAMLTQ GVGFVDIMNY AANGFSIETG
AGPMVDNMLN RGGISSMTVL LVTFMVASLM GGIIKATGIL EVIANEVLLK VIKGKTALVV
VTLIYGYVVN FLAAGGQTVS IIVTQQTFEE AYERLNVDRR VLSRCLEDSA TLSAPIVPWG
VATLFVMATL GCGLEYIPYC WFIFLVPIAA VVCAATNIGM WDADGNRMWG KYKGMKGAPG
KEPAQPVK
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