Gene Shel_17390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17390 
Symbol 
ID8395629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1965219 
End bp1966025 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID644986493 
Producthypothetical protein 
Protein accessionYP_003144107 
Protein GI257064435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTT ACATAGAATT GCCGAACGCA GAGGGAACCA TCCTGCGCGG CATGCTCCAC 
ATCCCCGACG CCGAAGCAAC CCGCAAGACC GCAAATGCCG AGGGGAAGAT CCCCTTCGTC
ATCTTGTTCC ACGGGTTCTG CGACGACCGG GCCGAAATCA ACTTCGTCCA CATCGACCTT
TCACGCCGCC TGGAGAAAGC CGGCATCGGC AGCGCCCGGT TCGACTTCGC GGGCAGCGGA
GAGTCCGACG GGGAGTTCAT CGACATGACC GTCTCCGGCG AAGTGTCTGA CGGCCTGGTC
ATTCTGGACT GGGCCAAAAC CCTGGACTTC GTCGACGTCG ACCGCATCGC CATCCACGGC
CTGTCCATGG GCGGATGCGT GGCGTCCATG GTTGCCGGCA CGCGTCCTGA CGAGGTCAAA
TGCCTGTCGC TGTGGTGCCC CGCCCCAGAT GTGGTCTACA ACATGAAGGA ACGCATGCTG
CTCTGCGGCA TCGACGCCAG CGACATCCGC GAAAAAGGCT ACGTAGACGT CGAAGGACTG
CAGGTGGGCG TCGGGTTCTA CGAAGACTGC CTGAACATCG ACCCCTTCGC AGTGGCGGCG
CACTACCACG GCCCCGTCAA CACCGTCCAC GGCGACGCGG ACACCACTGC GTCGTGCACC
TGCTCTGAGC GCTACAAGGA AATCTACGGC GACCGCTGCT CCTACACCGT CGTGCACGGG
GCCGAGCACC GGTTCAAGTC GGTGGACTTC CGCGCCGCAC GCATGAACTC CGCTATGGAA
TTCCTCACCC GCGAACTGGC CGAATAG
 
Protein sequence
MERYIELPNA EGTILRGMLH IPDAEATRKT ANAEGKIPFV ILFHGFCDDR AEINFVHIDL 
SRRLEKAGIG SARFDFAGSG ESDGEFIDMT VSGEVSDGLV ILDWAKTLDF VDVDRIAIHG
LSMGGCVASM VAGTRPDEVK CLSLWCPAPD VVYNMKERML LCGIDASDIR EKGYVDVEGL
QVGVGFYEDC LNIDPFAVAA HYHGPVNTVH GDADTTASCT CSERYKEIYG DRCSYTVVHG
AEHRFKSVDF RAARMNSAME FLTRELAE