| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17280 |
|---|
| Symbol | |
|---|
| ID | 8395618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1951948 |
|---|
| End bp | 1953150 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644986482 |
|---|
| Product | Zn-dependent dipeptidase, microsomal dipeptidase |
|---|
| Protein accession | YP_003144096 |
|---|
| Protein GI | 257064424 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.922551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTC GCAGGAAGAT GATCGAAACC ACTGCGGTAG GCATGGGTGC CGTTGCGATG
GGCGCCATGC CGTTGGCGGC ATGCGCATCG CAGCCCGAGG CGGAGACGGT TTCGAAGGCG
GGGGCCCGCC CCGAACCTGC TTCCGCAAAC GACGGAAGCA GCCTGTTTGA GGACGCATTT
GCCTCAGATG CCGCTTCGAA GGCGCAGTCC GCATCGGCAC CGGTGCCTTC CATACGCATG
CTGGACATGC ATTGCGACAC CGTGGACGAA CTGTGCATGC ACGGCCTGGG CGAATACCGT
GACGGCCGGG GCGCGGGCAC GCTCGTCAGC AACAACCTTC AGATAGCCGC CGACCGCATG
GGGGACGTTG CCTGGGCGCA GTGCTACGCC GTATGGACTC CGGACGAGTG CCCGGACATC
AGCTACGCGT CCTGGTACCG CCACGGCGCC GCATACTTCA AGGCCCAGAT GGCGGCCTAT
CCCGACGTGT TCACCCAAGT GTTCGACTGG GCTGATGTGG ACGGCATTCT GGATGAGGGC
AAGGTTGCGG CGATTCTTAC CGTCGAAAGT GCCCGCATCC TTGAGGAAGG CCTGGACATC
GTGGACGAGT TCGTTTCCGA CGGCGTGAAG ATCGCCTCCA TTAGCTGGAA CGGTGTGAAC
TCCATGGCCA GCGGGTTCAA AAGCGACGCC GGCTTGAGCG ACTACGGCCG GCAGGCCTTG
GCCGCGTTGG AGTCGGCGGG CATCGTGTTC GACGTGTCGC ACCTCAACGA TGCCGGGTTC
TGGGATGTCG AGGCCGCAGC CACCAAGCCC TATATCGCCA CCCATTCAAA TTCCCGGGCC
ATGTGCGACA CGCCTCGCAA TCTGACCGAC GACCAGTTCC GGGCCATCGT CGCCCGCGGC
GGGCTGGTCG GTCTCAACTA CTACCAGGCC TTCATCCGGG CGAACTGGAT GGAAGGCGAC
GCCGACACGG GTTTCGACGA GACGATCGCG CACGTGGAGC ATTGGCTGGA TATCGAAGGC
GGCCAGGACG TCATTGCCCT GGGAGGCGAT AGGGATGGGT CGGACGTGGC TCCGTGGCTT
GCGGGGTGCG AGACCCAGGC CGAGTTTTAC CGGCTCACGG TCGAGCGGCT GGGTCAGGAA
CTGGCCGACA AGCTGTTCTA CACCAACGCC CGAGACTTCT TCAACCGTTA CGTGAAAGCT
TAG
|
|---|
| Protein sequence | MMTRRKMIET TAVGMGAVAM GAMPLAACAS QPEAETVSKA GARPEPASAN DGSSLFEDAF
ASDAASKAQS ASAPVPSIRM LDMHCDTVDE LCMHGLGEYR DGRGAGTLVS NNLQIAADRM
GDVAWAQCYA VWTPDECPDI SYASWYRHGA AYFKAQMAAY PDVFTQVFDW ADVDGILDEG
KVAAILTVES ARILEEGLDI VDEFVSDGVK IASISWNGVN SMASGFKSDA GLSDYGRQAL
AALESAGIVF DVSHLNDAGF WDVEAAATKP YIATHSNSRA MCDTPRNLTD DQFRAIVARG
GLVGLNYYQA FIRANWMEGD ADTGFDETIA HVEHWLDIEG GQDVIALGGD RDGSDVAPWL
AGCETQAEFY RLTVERLGQE LADKLFYTNA RDFFNRYVKA
|
|---|
| |