| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_16530 |
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| Symbol | |
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| ID | 8395543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1858445 |
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| End bp | 1860154 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644986407 |
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| Product | hydrogenase, Fe-only |
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| Protein accession | YP_003144021 |
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| Protein GI | 257064349 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.143158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGC TGACCATCGA CGGCAAGACT ATTGAGGTTA AGGACAACGC CACCATCCTC
GGCGCCTGCA AACAGGCCGG GGCCGACATC CCCACGCTGT GCTGGATGAA GGGCCTGAAC
GACATCGGCT CCTGCCGTGT CTGCGTTGTC GACTGCGACG GCGAACTCGT GCCGTCCTGC
AACACCAACG TTCGCGAAGG CATGGTCATC AAGACCGGCA CGCCGCGCGT GGTTGCCGCC
CGCAAGGCCA ACATCGAAAC GCTCATGGAA AGCCATCGCG GCGAGTGCTC CTCCTGCGTG
CGTCAGGAGA CCTGCGCGCT GCGTGCCCTG GCAAGCGACT TCAACGTGGG CGAATCCGCC
TACTGCCTGC CCGAGAAGGG CATCTGGGAT GAGGACTTCC CGCTGATCCG CGACGCCTCC
AAGTGCATCA AGTGCATGCG CTGCGTGGCC GAGTGCTCCA AGGTCCAGTA CTGCTCCGTC
TGGGAGCATT CCGGCCCCGG CCCGCACATG AACGTGTTCG TCAAGGACGG CCTGGCCATC
GACGCCGCCG GCTGCGCCCT GTGCGGCCAG TGCATCACGC ACTGCCCGAC GGGTGCCCTG
ACCGCTCGCG ACGATACGGG CAAGGTCATG AAGGCCCTGC TCGATCCCGA GGTCATCACG
GTTGTCCAGG TTGCTCCCGC CGTCCGCGCC GCTTGGGGCG AAGGCGTGGG CCTCACCCGC
GAGCAGGCCA CGCCTAAGCG CATGGCTTCC GCCCTGCGCG CCCTCGGCTT CGACAAGGTG
TTCGACACCG ACTTCGCCGC AGACCTCACC ATCATGGAAG AGGGCAGCGA GTTCGTCGAG
TTCCTGAGCT CCGACAAGCC TCGCCCCATG TTCACCAGCT GCTGCCCGGG CTGGGTGCGC
TTCGTCAAGC TGCATTACCC CCAGTTCGTT CCTCAGCTGT CCTCGGCCAA GTCTCCCCAT
CAGATGGAGG GCGCGGTCGT CAAGAACACC ATGAAGGCCC AGGCCGAAGA AGAAGGCAAG
CGCCTGTTCG TCGTGTCCGT CATGCCCTGC GTGGCCAAGA AGTACGAATG CGACGTCCCG
CAGCTGTCCA CCGAGGCCGG CCGTGACGTC GACGCCGTTC TGACGGTTCG CGAATTCGAC
CGCATGCTGC ATATGTTCCG CGTTGATTGC GCGGCTCTGG AAGAGACCGA CTTCGACAAC
CCGCTGGGTC TGTCGACGGG CGCTGGCACC ATCTTCGGTC GTACCGGCGG CGTTATGGAA
GCCGCCCTGC GTTCCGCTGT GTTCCTGATC ACGGGCCAGA ACCCGGACTT CTCCGCTTGC
GACACCACCG AGTCGACCCC CGAGAAGCCT TGGATCTCCA AAGAACTCGA CGTTGCCGGC
ACCAAGGTGA ATATCGCCGT TGCCAGCGGC TTGGGCAACA CCGCCAAGCT GCTCGACGCC
CTCGAGGCTG GCGAAGTCCA CTTCGACTTC GTCGAGATCA TGGCGTGCCC CGGTGGCTGC
GTCGGCGGTG GCGGACAGCC CATCGAGTTC AACAAGGAGC TCGCGCTTGA GCGTGCTGCC
AACCTGAACG CTCTGGACGA GGCCGACACC CTGCGTTACT CGCATGAGAA CCCGGATATC
CAGAAGCTCT ACGCCGATTG GGTCGGCAAG CCGCTGTCTC ATGTTGCGCA TGAGTGGCTG
CACACCGATC AGACCACGTG GGACATCTAA
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| Protein sequence | MVKLTIDGKT IEVKDNATIL GACKQAGADI PTLCWMKGLN DIGSCRVCVV DCDGELVPSC
NTNVREGMVI KTGTPRVVAA RKANIETLME SHRGECSSCV RQETCALRAL ASDFNVGESA
YCLPEKGIWD EDFPLIRDAS KCIKCMRCVA ECSKVQYCSV WEHSGPGPHM NVFVKDGLAI
DAAGCALCGQ CITHCPTGAL TARDDTGKVM KALLDPEVIT VVQVAPAVRA AWGEGVGLTR
EQATPKRMAS ALRALGFDKV FDTDFAADLT IMEEGSEFVE FLSSDKPRPM FTSCCPGWVR
FVKLHYPQFV PQLSSAKSPH QMEGAVVKNT MKAQAEEEGK RLFVVSVMPC VAKKYECDVP
QLSTEAGRDV DAVLTVREFD RMLHMFRVDC AALEETDFDN PLGLSTGAGT IFGRTGGVME
AALRSAVFLI TGQNPDFSAC DTTESTPEKP WISKELDVAG TKVNIAVASG LGNTAKLLDA
LEAGEVHFDF VEIMACPGGC VGGGGQPIEF NKELALERAA NLNALDEADT LRYSHENPDI
QKLYADWVGK PLSHVAHEWL HTDQTTWDI
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