Gene Shel_16510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16510 
Symbol 
ID8395541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1856990 
End bp1858045 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content62% 
IMG OID644986405 
Productiron-only hydrogenase maturation protein HydE 
Protein accessionYP_003144019 
Protein GI257064347 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGC GTTCTTGCGA ACTGATCGAG AAGCTCGGCG AGACCCGTTG CCTTGAGCTG 
CATGAATACG AGCACCTCGT GTCCCATATG AATGCCGAGG TTGCCCGGTT CGCGGCGGAG
CGTGCCCTGC GTGCGCGCAA GGCCGTGTAC GGAAACGGGG TGTTCACGCG AGGTCTGATA
GAGGTTTCGA ACTTCTGCAA GAACGACTGC CTGTACTGCG GGATTCGTCG CAGCAACCGC
TCGTGCCATC GGTACCGCCT GGCTGTCGAC CAGATTCTGG CCTGCGCCGA CGTGGGATAC
GAAGTGGGTT TCCGCACCTT CGTGTTGCAG GGTGGGGAAG ACCCGTGGTT TACCGACGAG
CGCGTATGCG ACTGCGTGCG GCGTCTGAAG CAGCGGCATC CCGACTGCGC CGTCACCCTG
TCGCTCGGCG AGCGCAGCCC CGAAAGCTAC CAGGCGCTTC GTGAGGCAGG GGCCGACAGG
TACCTGCTTC GCCACGAAAC TGCGACGCCC GGGCATTATG CAAGGCTGCA TCCCGCCGAC
ATGAGCTGGG ATGCGCGGAT GGCATGTCTT TACAGCTTGC GGGAGGCAGG TTTCACGGTC
GGATGCGGAT TCATGGTGGG CTCGCCGTTC CAAACGCCCG CCGACCTGGC AGCCGATCTG
AAGTTCATCG AAACCTTCGC TCCCGAGATG TGCGGCATAG GACCCTTCAT TCCGCACCAT
GCAACGCCCT TTGCGGCAGA GCCTGCGGGA ACGGTGGACA TGACCTGCTT TCTGCTGTCG
CTTCTGCGGA TCATGCAGCC AAACCTGCTT CTGCCCGCAA CCACGGCTTT GGGCACGGCG
GATCCCTTCG GAAGGGAAAA GGGCATGCTT GCCGGCGCGA ACGTCGTCAT GCCGAACCTG
TCGCCACAGG ACGTGCGCCA GGATTACGAG CTGTACGACG ACAAGGTCTC GACGGGTGGC
GAATCCGCCG AAGGCTTGAA CGAACTGGCC GAACGTATGG TCGCTATCGG CTTCGAGCTT
CTAGTCGATA GGGGCGATCC GAGGCCCATG AAGTAA
 
Protein sequence
MDPRSCELIE KLGETRCLEL HEYEHLVSHM NAEVARFAAE RALRARKAVY GNGVFTRGLI 
EVSNFCKNDC LYCGIRRSNR SCHRYRLAVD QILACADVGY EVGFRTFVLQ GGEDPWFTDE
RVCDCVRRLK QRHPDCAVTL SLGERSPESY QALREAGADR YLLRHETATP GHYARLHPAD
MSWDARMACL YSLREAGFTV GCGFMVGSPF QTPADLAADL KFIETFAPEM CGIGPFIPHH
ATPFAAEPAG TVDMTCFLLS LLRIMQPNLL LPATTALGTA DPFGREKGML AGANVVMPNL
SPQDVRQDYE LYDDKVSTGG ESAEGLNELA ERMVAIGFEL LVDRGDPRPM K