| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_16350 |
|---|
| Symbol | |
|---|
| ID | 8395525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1837043 |
|---|
| End bp | 1837987 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986389 |
|---|
| Product | Undecaprenyl-diphosphatase |
|---|
| Protein accession | YP_003144003 |
|---|
| Protein GI | 257064331 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0173909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTTG AAATACTGAA GGCCTTCCTC ATCGGCGTAG TGGAGGGCGT TACCGAATGG
CTGCCCATTT CGTCGACGGG CCACATGATC CTGGTCGACG AATTCGTGAA GCTCAACGTT
TCCGACGACT TCCTCAAGCT GTTCCTGGTG GTCATCCAGA TCGGTGCCAT CCTGGCCGTC
ATCATCCTGT ATTTCAACAA GCTGAACCCG TTTTCTGGCA AGAAGGCCGC GCAGGAACGG
CGTGCCACGT GGCGCCTGTG GGGCATGGTC GTCATCGGAT GCTTGCCCGC TGCGGTAGTC
GGCCTGCTGC TGGACGACTG GGTGGGCGAT CACTTCTACA ACGCCGCCGT CGTGGCATCC
ATGCTGATCC TCTACGGCGT CGTGTTTATC GTGCTTGAAC GACGCAACCG CGAGAAACTG
GCAAACTACG AGGCTCTGGT CGAGCAGGGC GGGGCCATCG GTGCCCAAGC GCCTCGGCTG
GAGGACGGTT CGGTCGATCC GGACGGTATG TTCGCCATCC AGACGGTGGA CGACATCGAC
TGGAAGGCCG CTCTGAAGAT CGGCCTGTTC CAGTGCCTGG CCATTATCCC CGGCACCAGC
CGTTCCGGCG CCACCATCAT CGGCGGCATG CTCACCGGAT GCTCGCGCAC CGCGGCGGCC
GAGTTCACGT TCTTTTTGGC CATCCCCATC ATGTTCGGCT GGGGCTTGGT CAAAATCGTC
AAGTACATGG CGGCTATGGC GTCTGCCACC GGCCCCATCA TGACCTCGGT GGAAGCGGTT
GTCCTGCTGG TGGGCATCGT GACGGCCTTC GTCGTGTCGG TCATCTCGAT CAAGTTCCTT
ATGGGCTACA TCAAGAAGAA CGACTTTGCT CTCTTCGGCG TGTACCGCAT CGTCGTCGGC
ATTTTGGTGT TGGCCTACTT CGGCGTGAAG GCGCTGCTTT TCTAG
|
|---|
| Protein sequence | MLFEILKAFL IGVVEGVTEW LPISSTGHMI LVDEFVKLNV SDDFLKLFLV VIQIGAILAV
IILYFNKLNP FSGKKAAQER RATWRLWGMV VIGCLPAAVV GLLLDDWVGD HFYNAAVVAS
MLILYGVVFI VLERRNREKL ANYEALVEQG GAIGAQAPRL EDGSVDPDGM FAIQTVDDID
WKAALKIGLF QCLAIIPGTS RSGATIIGGM LTGCSRTAAA EFTFFLAIPI MFGWGLVKIV
KYMAAMASAT GPIMTSVEAV VLLVGIVTAF VVSVISIKFL MGYIKKNDFA LFGVYRIVVG
ILVLAYFGVK ALLF
|
|---|
| |