Gene Shel_16270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16270 
Symbol 
ID8395517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1828436 
End bp1828906 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content60% 
IMG OID644986381 
ProductSSU ribosomal protein S7P 
Protein accessionYP_003143995 
Protein GI257064323 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.89839e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.25179e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCGTC GTGCAGCAGC AACCCGCCGC GAAGTGCAGC CGGATGCAAG GTACAACAAT 
CGTTTGGTCA CGCAGCTGAT CAATAAGGTC CTCCTGGACG GCAAGAAGTC CGTCGCAGAA
GGCATTGTCT ATGGTGCGTT TGACATCGTC GCCGAAAAGA CCGGCCAGGA TCCGCTGACC
GTCTTCAAGA AGGCCATGGA CAACGTTCGC CCCACGCTGG AGGTCAAGCC CAAGCGTATC
GGTGGCGCTA CCTATCAGGT CCCCATGGAG GTCGCACCCC GTCGTGCCAC CACCCTGGCC
ATCCGCTGGC TCGTCGACTT CTCCCGCAAG CGCAAGGAGC ACACCATGGC TCAGCGCCTT
GCTCAGGAGA TCATCGACGC CTCTGAGAAC ACCGGTGCTT CCGTGAAGCG TCGCGAGGAT
CTCTACAAGA TGGCCGAATC CAACCGTGCG TTCTCGCACT ATCGTTTCTA G
 
Protein sequence
MPRRAAATRR EVQPDARYNN RLVTQLINKV LLDGKKSVAE GIVYGAFDIV AEKTGQDPLT 
VFKKAMDNVR PTLEVKPKRI GGATYQVPME VAPRRATTLA IRWLVDFSRK RKEHTMAQRL
AQEIIDASEN TGASVKRRED LYKMAESNRA FSHYRF