Gene Shel_16230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16230 
Symbol 
ID8395513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1824687 
End bp1825310 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content62% 
IMG OID644986377 
Productribosomal protein L4 
Protein accessionYP_003143991 
Protein GI257064319 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.308573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.46284e-08 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTACTA TTGAAATCAA GAATGCCAGC GGCGAGAAGG CCTCCGAGGT CGAGCTCGAG 
TCCGCTGTGT TCGGCATCGA GCCGAACGTG CATGTGATGC ATACGGTCGT CCGCTCCCAG
CAGGCGGCCA TGCGTCAGGG CACGCATGAC ACCAAGACCC GCGGCGAAGT TCGCGGCGGC
GGCAAGAAGC CGTGGCGTCA GAAGGGCACC GGCCGTGCCC GTCAGGGTAC CATCCGTGCA
CCCCAGTGGG CTGGCGGCGG CACCGTCTTC GGTCCTCATC CCCGCAGCTA CGCCTTCCGC
GTGAACCGTA AGGAAGTCAA GCTGGCCATG CGCTCTGCGC TGTCTGCCAA GCTTGCCGAT
GGCCAGCTGA TGGTCGTCGA GGACTTCAAG TTCGAGAAGC CTTGCACCAA GGAAGCCGTC
GCTTTCCTGA AGGCCAACGG TCTTGACCGT CGCACCACCA TCGTCATTCC GAATGACGAC
GTGAACGCGT ACCTGTCCTT CCGCAACATC CCCAAGGTCA ACGTCATCTC CGTCGGAGAG
GCCAACACCA TGGAACTGAT CGACAACAAG GTCCTGGTGC TCACCGCATC GACCCTGAAG
CGTCTCGAGG AGGTGCTGAA GTAA
 
Protein sequence
MATIEIKNAS GEKASEVELE SAVFGIEPNV HVMHTVVRSQ QAAMRQGTHD TKTRGEVRGG 
GKKPWRQKGT GRARQGTIRA PQWAGGGTVF GPHPRSYAFR VNRKEVKLAM RSALSAKLAD
GQLMVVEDFK FEKPCTKEAV AFLKANGLDR RTTIVIPNDD VNAYLSFRNI PKVNVISVGE
ANTMELIDNK VLVLTASTLK RLEEVLK