Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16230 |
Symbol | |
ID | 8395513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1824687 |
End bp | 1825310 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986377 |
Product | ribosomal protein L4 |
Protein accession | YP_003143991 |
Protein GI | 257064319 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.308573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000146284 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTACTA TTGAAATCAA GAATGCCAGC GGCGAGAAGG CCTCCGAGGT CGAGCTCGAG TCCGCTGTGT TCGGCATCGA GCCGAACGTG CATGTGATGC ATACGGTCGT CCGCTCCCAG CAGGCGGCCA TGCGTCAGGG CACGCATGAC ACCAAGACCC GCGGCGAAGT TCGCGGCGGC GGCAAGAAGC CGTGGCGTCA GAAGGGCACC GGCCGTGCCC GTCAGGGTAC CATCCGTGCA CCCCAGTGGG CTGGCGGCGG CACCGTCTTC GGTCCTCATC CCCGCAGCTA CGCCTTCCGC GTGAACCGTA AGGAAGTCAA GCTGGCCATG CGCTCTGCGC TGTCTGCCAA GCTTGCCGAT GGCCAGCTGA TGGTCGTCGA GGACTTCAAG TTCGAGAAGC CTTGCACCAA GGAAGCCGTC GCTTTCCTGA AGGCCAACGG TCTTGACCGT CGCACCACCA TCGTCATTCC GAATGACGAC GTGAACGCGT ACCTGTCCTT CCGCAACATC CCCAAGGTCA ACGTCATCTC CGTCGGAGAG GCCAACACCA TGGAACTGAT CGACAACAAG GTCCTGGTGC TCACCGCATC GACCCTGAAG CGTCTCGAGG AGGTGCTGAA GTAA
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Protein sequence | MATIEIKNAS GEKASEVELE SAVFGIEPNV HVMHTVVRSQ QAAMRQGTHD TKTRGEVRGG GKKPWRQKGT GRARQGTIRA PQWAGGGTVF GPHPRSYAFR VNRKEVKLAM RSALSAKLAD GQLMVVEDFK FEKPCTKEAV AFLKANGLDR RTTIVIPNDD VNAYLSFRNI PKVNVISVGE ANTMELIDNK VLVLTASTLK RLEEVLK
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