Gene Shel_16220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16220 
Symbol 
ID8395512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1824399 
End bp1824686 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content54% 
IMG OID644986376 
ProductLSU ribosomal protein L23P 
Protein accessionYP_003143990 
Protein GI257064318 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.491689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.09599e-08 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGGATC CCCGCGAGGT CATCATCCGC CCGGTCATCA CCGAGCATAG CTATGACATG 
ATGGAGAAGA ACACCTACAC CTTCGAGGTT GCCAAGGATT CCAACAAGGT TGAGATTGCC
AAGGCTGTCG AAGAGATCTT CAAGGTTAAG GTTGTCAAGG TCAACACCAT CAACGTCAAG
CCGAAGCCGA AGCGTGTTCG CTACCAGGCC GGTTACACCC GTTCCTGGAA GAAGGCCATG
GTCACCCTGG CCGAAGGCGA CTCTATCGAG CTGTTCGCCG TCAACTAA
 
Protein sequence
MKDPREVIIR PVITEHSYDM MEKNTYTFEV AKDSNKVEIA KAVEEIFKVK VVKVNTINVK 
PKPKRVRYQA GYTRSWKKAM VTLAEGDSIE LFAVN