Gene Shel_16200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16200 
Symbol 
ID8395510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1822784 
End bp1823314 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID644986374 
Producttartrate dehydratase beta subunit/fumarate hydratase class I 
Protein accessionYP_003143988 
Protein GI257064316 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.26622e-08 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAGAAC AGCGCCGGCT TTCCCTCCCT CTGAACCGCG ATGAGCTGAA AACCCTGGCC 
ATGGGCGATG CCTGCTTGCT CACGGGCACG ATGTACATGC TGCGCGACGC AGGCCACATC
CGCCTTCTGG CCGAACTGCA TGAACAGGGA AGCCTTCCGT ACGGCCTTGA CGGGCAGGCG
ATCTTCTACG CAGGACCCAC GCCTCCTTCC GCAGGACGTC CCTTCGGCGC TGTTGGTCCC
ACCACGGCCT CACGCATGGA TTTCGCGGCA CCGGAGCTCT ACCATGCCGG CATCGCTGCA
ACGCTTGGCA AAGGCGTGCG CTCCGATGAA GTTCGCCAGG CCTGCATCGA CACCGGGTCG
GTGTATTTCG TCACCACGGG CGGCGCCGCC GCGCTGTTGG CGAAGTGCGT GACGTCGGGC
GAGGTCGTAG CCTACGACGA CCTGGGCACC GAGGCGCTGC GACGCATCGA GGTCGTCGAC
TTCCCGGCGT TTGTCGGCAT CGATACTGCA GGAGCATGCA TCTATGACTG A
 
Protein sequence
MTEQRRLSLP LNRDELKTLA MGDACLLTGT MYMLRDAGHI RLLAELHEQG SLPYGLDGQA 
IFYAGPTPPS AGRPFGAVGP TTASRMDFAA PELYHAGIAA TLGKGVRSDE VRQACIDTGS
VYFVTTGGAA ALLAKCVTSG EVVAYDDLGT EALRRIEVVD FPAFVGIDTA GACIYD