| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15980 |
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| Symbol | |
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| ID | 8395488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1795543 |
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| End bp | 1796751 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986352 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003143966 |
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| Protein GI | 257064294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000235485 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGCGCAA CGAATCGCAG ACATACTGAG GAAACCATCT GGAGCGCTCC GTTTGTCATC
TTGATGGCGT CGAACTTCTT CCAGAGTCTG GCGGCGTTCA CGGCCAACAC TACGTTGCCG
CTCTACATCG ACCGCATGGG CGCAAGCGCC GGCATGGTGG GCGTCATCAT CGGCGCCTTC
GCGATAACGG CCCTGCTGAT CAGGCCGTTC GCGGGTCCCG CATTCGACAG CTTCTCGCGC
AAGAGGATTC TTCTGGCGGC GCAAGGCATC ATCGCCCTGG CCTTCTTGCT GTACAGCTTC
GCACGTACCT CTTGGGCCTT GTTCGCGGTG CGTCTTCTTC ACGGGCTTGG CATAGGGTGC
GCAGGCCCCG TGGCTATGTC GCTGGTCAGC GAGTACCTCC CCATGTCCAA ATTTGCCAGC
GGTGTGAGCA TCTACATGCT GTCGCAATCC TTCGCCCAGG TCATAGGGCC TGCGGCAGGC
CTTTGGATGG CAGATGCGTT TGGGTTCCAG GTAACATACC GCATCGCCGC ATGCATGCTG
CTGTTTTCGG TTTTAGCCAT CACGCGAGTG AGGGAGACCC CGCGCGAACG CCCACCGTAC
CAGTTAAGGC TGGACCGCAT GTTCGCTCGC GAGGCGGTGG GCAAGGCCAT TGTGCTGACG
CTGTTCGCGG CGGCGTTCGC ATGCGTGGGG TCGTATCTGG TGCTGTATGC AAACAGGCTC
GGCATTGCCG ACATCGGCAG CTATTTTGTG GTGTATGCGA TTTGTCTTCT GGGCACGCGG
CCGCTTTTCG GTCGCCTGGC GGACAACTTC GGAGCCGAGC GGGTTTTGCT TGCGGGCGTA
GCGTGTTTTG CACTCTCCTA TGTGGTGCTT TCCCAGGCTG CGACGTTGCC AGGCTTTCTT
GTGGCGGCTG TCATCGGGGC GGCGGGCTTC GGCTCATGCG TGCCCTTGGT GCAGACCTTG
GCCATGGCCA GCGTGGATGC GGAGAGGCGG GGTGCGGCCA GCAATACCAG CTTCACCGGG
ATGGATCTCG GTTTTCTTGT AGGCCCGGCT GTCGCAGGTG CCGTGATCGA GCTGCTCGAC
ATGGCCACAG GCAGCATCCT TGAGGCGTAC AGTCTTGTGT GGCTTGTCAT GTTGGTGCCT
TTGGCCTGCG CTTTTGCCAT TATCCTTCGA TGGAACCTCC GCAGGGGTAG CGGGCAGCGC
CAAAGGTAG
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| Protein sequence | MGATNRRHTE ETIWSAPFVI LMASNFFQSL AAFTANTTLP LYIDRMGASA GMVGVIIGAF
AITALLIRPF AGPAFDSFSR KRILLAAQGI IALAFLLYSF ARTSWALFAV RLLHGLGIGC
AGPVAMSLVS EYLPMSKFAS GVSIYMLSQS FAQVIGPAAG LWMADAFGFQ VTYRIAACML
LFSVLAITRV RETPRERPPY QLRLDRMFAR EAVGKAIVLT LFAAAFACVG SYLVLYANRL
GIADIGSYFV VYAICLLGTR PLFGRLADNF GAERVLLAGV ACFALSYVVL SQAATLPGFL
VAAVIGAAGF GSCVPLVQTL AMASVDAERR GAASNTSFTG MDLGFLVGPA VAGAVIELLD
MATGSILEAY SLVWLVMLVP LACAFAIILR WNLRRGSGQR QR
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