Gene Shel_15940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_15940 
Symbol 
ID8395484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1791580 
End bp1791939 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content60% 
IMG OID644986348 
Productpredicted transcriptional regulator 
Protein accessionYP_003143962 
Protein GI257064290 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0473945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000239728 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAATAC AGCTGAACAG GCTTCGAAAT CTTAGGGGGC TGTCGCAAGA GGACATGGCA 
CAAAGATTAG GAATCAAGAA GAGCCGCTAC GGAACTTGGG AGCGTGGCGA GCGAATGATG
AACCTCGCTC AGGCGTGCCA ATGCTGCGAC GTGCTCGGAT GCTCGCTTGA CGAGCTCGCG
GGCAGGGAGG CCCCTCACCT CTACACGGAC AGGCGGCAGG AGACCCTCAA CGAGGACTTC
GCCAGGCTAG ATAACGAGGG GAAGGACGCA GCAATGGCCG CAGTCCGCGG CATCGCCTCC
ATGCAGGCGG AAAAAAGCGT TTCTCGCCCG AGGTCTGACG GTGCTGAAGG CGCCGCATAG
 
Protein sequence
MEIQLNRLRN LRGLSQEDMA QRLGIKKSRY GTWERGERMM NLAQACQCCD VLGCSLDELA 
GREAPHLYTD RRQETLNEDF ARLDNEGKDA AMAAVRGIAS MQAEKSVSRP RSDGAEGAA