| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15350 |
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| Symbol | |
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| ID | 8395425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1756943 |
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| End bp | 1758247 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644986289 |
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| Product | predicted DNA-binding protein with the helix-hairpin-helix motif |
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| Protein accession | YP_003143904 |
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| Protein GI | 257064232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000164569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0902203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACTGC TACGCAAGTT GGAAATACTT GCCGACGCCG CAAAATACGA TGTAGCGTGC
ACATCCAGCG GCGTTGAGCG AAAAGCCAAG GGCGGGCAGC TCGGTGCGGC AAGCCCGTCG
GGGTGTTGCC ATAGTTTCAC GCCGGACGGT CGCTGCGTCA CGCTTCTCAA GGTGTTGTAT
ACGAATTGCT GCGTGTACGA CTGCGCCTAC TGCGTGAACC GCAAAAGCAA CGATGTGCCC
AGGGCGGCTT TCTCGCCCCG AGAACTGGCG GATCTGACCA TCGAATTCTA TCGTCGCAAC
TATATTGAAG GGCTGTTCAT CTCGAGCGGG GTCATTGTCA GTCCTGACAG AACCATGGAG
CTTATGTCCG AAGCGATGCG CATTCTCAGA ATCGAGTACG GGTTCAGGGG CTACATCCAT
GCGAAGGCGG TTCCAGGGGC TTCGCCTGAG CTTGTGGAGC AGATGGGCTT TCTTGCGGAC
CGCATGAGTG TGAACATGGA GCTCCCCTCG GAGGAAAGCC TGAAGGCGCT CTGTCCGCAG
AAGGACAGGG CAAGCATCCT GGCGCCCATG CGCCAGATAA AAGAAGGCGT TGCGGAGGAC
AAGGAGTCGA AGGCAATCGC TACGCGCAAT CCGGTCACCT CGGTTCGCGC ACGGGCGAAA
AAGGCCCAGC GTGCTTTCGT GCCAGCGGGC CAGAGCACGC AGATGATCAT CGGCGCCACG
CCGGAGTCCG ATCTGCACAT CTTGTCGCTG TCGTCATCGC TGTACCGAAA CTTCAATCTG
AAACGCGTGT TCTTCTCGGC ATACCTGCCA GTGTCGCAAG ATGCACGTTT GCCGCAAGGC
GGTGCTGTGC AGCTGGACAG GGAACATCGT CTCTATCAGG CGGATTGGCT CATGCGCTTC
TATAGTTTCG CAGCGGATGA GATTGTGAGC GAAAAACACC CGTTTCTCGA CATCGACCTG
GATCCAAAGG CGTATTGGGC CATCAATCAT CTTGAAACGT TTCCCGTCGA GGTGAACACC
GCACCGTATG AGCTGCTTCT GAGGGTGCCA GGCATCGGCG TTCGGGGTGC GAAGCTCATC
GTGCGTGCTC GGAAGAGCCA GGGTTTGGAC GAGCAGAAGC TTCGCAAACT CGGTATCGCA
TTCAAACGGG CGAAGTACTT CATCACCTGC GGCGGCAAAT ACCAGGGCAA AGGGACGGAT
TTCACGACGG AAGCGTTGCG GGCGGTACTG AAGGGTCCCA TCGACGGCGG CAAGCACGGT
CGGCGCTCTG CGCGCGTCCA CCCCAACCAG CTGACGCTGT TCTAG
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| Protein sequence | MELLRKLEIL ADAAKYDVAC TSSGVERKAK GGQLGAASPS GCCHSFTPDG RCVTLLKVLY
TNCCVYDCAY CVNRKSNDVP RAAFSPRELA DLTIEFYRRN YIEGLFISSG VIVSPDRTME
LMSEAMRILR IEYGFRGYIH AKAVPGASPE LVEQMGFLAD RMSVNMELPS EESLKALCPQ
KDRASILAPM RQIKEGVAED KESKAIATRN PVTSVRARAK KAQRAFVPAG QSTQMIIGAT
PESDLHILSL SSSLYRNFNL KRVFFSAYLP VSQDARLPQG GAVQLDREHR LYQADWLMRF
YSFAADEIVS EKHPFLDIDL DPKAYWAINH LETFPVEVNT APYELLLRVP GIGVRGAKLI
VRARKSQGLD EQKLRKLGIA FKRAKYFITC GGKYQGKGTD FTTEALRAVL KGPIDGGKHG
RRSARVHPNQ LTLF
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