Gene Shel_15260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_15260 
Symbol 
ID8395416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1747877 
End bp1748461 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID644986280 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_003143895 
Protein GI257064223 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.802497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.249652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGG CACATGTGGC TCGCGCCACG AAAGAGACCG ATATCGCAAT CGAGCTGGAG 
CTGGACGGAA CCGGTTGTGT GGACGTGTCC ACTGGCGTGG GGTTCTTCGA CCACATGCTG
GACGCCTTCG GACGCCACGG CCTGTTCGAC CTCAAGGTTC AGGCTAAAGG CGACATCCAG
GTGGACGACC ACCACACCGT CGAGGACTGC GGCATCGTGC TGGGCCAGGC GTTCGCCCAG
GCCATCGGCG ACAAGAAGGG CATCCGCCGC TTCGGGTCGT CATACGTGCC CATGGACGAG
ACGCTGGTGC TTGCCGCCGT CGACTTCTCC GGCCGCGGCC AGGCATACTA CGAGGTGCCT
GTCGCCACGC AGAAGGTGGG CACGTTCGAC ACGGAGTTGG CGAAGGAATT CTTCATCGCG
TTCGCCCGTG AGGCCGGCGT CACGCTGCAC GTTCGTCTGA TCTGCGGGGA GAATTCGCAC
CACATCATCG AGGCCGCCTT CAAGGCTTGC GGACGCGCGC TGCGCGAAGC CTGCGAGGAC
GATCCCCGTG TGGAGGGCGT GCCTTCCACC AAGGGTTCGC TGTAG
 
Protein sequence
MRQAHVARAT KETDIAIELE LDGTGCVDVS TGVGFFDHML DAFGRHGLFD LKVQAKGDIQ 
VDDHHTVEDC GIVLGQAFAQ AIGDKKGIRR FGSSYVPMDE TLVLAAVDFS GRGQAYYEVP
VATQKVGTFD TELAKEFFIA FAREAGVTLH VRLICGENSH HIIEAAFKAC GRALREACED
DPRVEGVPST KGSL