Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14960 |
Symbol | |
ID | 8395386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1717905 |
End bp | 1719803 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986250 |
Product | ATPase family protein associated with various cellular activities (AAA) |
Protein accession | YP_003143865 |
Protein GI | 257064193 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.426512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACAA CGCCTCAATG GCAGAAGGAA ATCGAAAACT TCGTCGGCAT CAAATCGGCC CTCATCATCG AAGGCAACGT GTTCGACCTG TACCCGTTCC TCGAAGGCGA CGACGAGGAC GACATCGAGT TCCTCACCCT CAACGAACTG CTCCCCCGTC TGTTCGAACG CGGCACCGCC CACGCTGGCG AAAGCGGCCG CCCGTATCGG TTCATCTACT GCGATCCGCT GCGCGGCATC AGCAACCCGT TGGGGGACGC GGACCTGGCG GCCATCACGA AAGCCGCCGC CAAGGAAGCC GACGTGCTTG GCCGCGAGAA CGAGTCCTAC AACCCCAATG TCGGAAACGA CCCGAACGCC CAAAGCCGTC TGGTGCAGAA CTCCTTGCTG CTGCGGGCGG CGCTTACCCG ACGCATCGAC ATTCCCGCTA TGGATAACAC CCCTGTGGCC TGCGTTTATT CCTTTGCATC GCGCCTCACG TCCCGCCCCA GCGACCTATC GGCCGAAGAG AACGCCGTGT TCCTGAACCT GTATCTGGCG GTCACCGAGG CCATCCGCGT GGACGGGTCG AACCGAAACA CCCTGGTGCT CATCGTCAAC AAGGTCGCCG ACGTGCCCAG CTGGTTTTTC ACCAACAACC CCGAGGTCCG TTCAGTCATC GTGCCGAACC CGGATCGCGA CACCCGCGCC GCCTTCGTGG ATTATGCCTT CTCGTCGCTT TCCGACGACA ACCTGGAAGA CGTCCGCGAG AAGTTCATCG ACGTGACCGA CTCCATGAAG GTACTCGAGC TCGACGAGTT GCGCCGCCTA CGCATCAAGG GCGACACGTC GCCCGAACAG TTCCCCGAGC TGGTGGACAT CTACAAATAC GGCCTGAAGG AGAACAAGTG GGCGTCCATC GTGGACAAGC TCCGCGATGA CCCCGAAGAG AAGCTCCGTC GCCGCGTCAA GGGTCAGGAC CGCGCCTTGA GCAAGATAGT CACCGTGCTC AAGCGCAGCG TCATGGGCTT TTCCGGCATG CAGCATTCAT CGGGCTCCAA GCCCAAAGGC GTGCTGTTTT TGGCAGGCCC CACAGGCACG GGCAAGACCG AAGTGGTCAA GGCCGTCACC GAGCTCTTGT TCGGCGACGA GCGTAGCTAC CTGCGTTTCG ACATGAGCGA ATACGCCTCC GAGAACTCCG ACCAGAAGCT GTTCGGTGCG CCTCCGGGAT ACGTCGGATA CGAGGAAGGC GGTCAGCTGA CCAACGCCGT CAAGGCGAAC CCCTTCTCGG TGCTGCTGTT CGACGAGGTC GAGAAGGCCC ACCCCTCCAT CATGGACAAA TTCCTGCAGA TTCTGGAAGA CGGGCGCATG ACCGACGGCC AGGGCAACAC GGTGTATTTC AGCGAGACGC TCATCTTCTT CACCAGCAAC GTAGGCATAT CTGAGGAGAT CCTAGACGAA CACGGCCGCG CCGTCGGACG CCGCAACATC GTCGAGCCCG GCGAACCTTA CGAAGACATC GAGCGCAAAG TATCCGAAGC CATGGCCATC CATTTCAAGC CGGAGGTGCT CAACCGCATC GGCGACAACA TCGTGGTGTT CGACTACATC AGCCCCGAGG CGTCGTCGCT CATCGCACGC TCGCAGCTGA AGAAGATCAA CGGCAACATC CTCAAGCGCC ACGAGATCCG CGTCACGCCG ACCGATGCCT GTCTGGATTG GTTCTGCACC CACGCCCTTG ATGCTCCCGT CCGTGAGAAA GGTGGCCGCG GTATCGGCAA CCTGATCGAG GCGAACTATT TGAATCCCCT GTCGAGTTAC ATCTTCGACG CCCGAATCGA AGCCGGCCAG ACCGTGGTGG TTGACGCAGT CGACGACCAT GTCACCTTCG CACGCGGCTC GGCAGACGAG GTGGCATGA
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Protein sequence | MFTTPQWQKE IENFVGIKSA LIIEGNVFDL YPFLEGDDED DIEFLTLNEL LPRLFERGTA HAGESGRPYR FIYCDPLRGI SNPLGDADLA AITKAAAKEA DVLGRENESY NPNVGNDPNA QSRLVQNSLL LRAALTRRID IPAMDNTPVA CVYSFASRLT SRPSDLSAEE NAVFLNLYLA VTEAIRVDGS NRNTLVLIVN KVADVPSWFF TNNPEVRSVI VPNPDRDTRA AFVDYAFSSL SDDNLEDVRE KFIDVTDSMK VLELDELRRL RIKGDTSPEQ FPELVDIYKY GLKENKWASI VDKLRDDPEE KLRRRVKGQD RALSKIVTVL KRSVMGFSGM QHSSGSKPKG VLFLAGPTGT GKTEVVKAVT ELLFGDERSY LRFDMSEYAS ENSDQKLFGA PPGYVGYEEG GQLTNAVKAN PFSVLLFDEV EKAHPSIMDK FLQILEDGRM TDGQGNTVYF SETLIFFTSN VGISEEILDE HGRAVGRRNI VEPGEPYEDI ERKVSEAMAI HFKPEVLNRI GDNIVVFDYI SPEASSLIAR SQLKKINGNI LKRHEIRVTP TDACLDWFCT HALDAPVREK GGRGIGNLIE ANYLNPLSSY IFDARIEAGQ TVVVDAVDDH VTFARGSADE VA
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