Gene Shel_14960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14960 
Symbol 
ID8395386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1717905 
End bp1719803 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content61% 
IMG OID644986250 
ProductATPase family protein associated with various cellular activities (AAA) 
Protein accessionYP_003143865 
Protein GI257064193 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.426512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAA CGCCTCAATG GCAGAAGGAA ATCGAAAACT TCGTCGGCAT CAAATCGGCC 
CTCATCATCG AAGGCAACGT GTTCGACCTG TACCCGTTCC TCGAAGGCGA CGACGAGGAC
GACATCGAGT TCCTCACCCT CAACGAACTG CTCCCCCGTC TGTTCGAACG CGGCACCGCC
CACGCTGGCG AAAGCGGCCG CCCGTATCGG TTCATCTACT GCGATCCGCT GCGCGGCATC
AGCAACCCGT TGGGGGACGC GGACCTGGCG GCCATCACGA AAGCCGCCGC CAAGGAAGCC
GACGTGCTTG GCCGCGAGAA CGAGTCCTAC AACCCCAATG TCGGAAACGA CCCGAACGCC
CAAAGCCGTC TGGTGCAGAA CTCCTTGCTG CTGCGGGCGG CGCTTACCCG ACGCATCGAC
ATTCCCGCTA TGGATAACAC CCCTGTGGCC TGCGTTTATT CCTTTGCATC GCGCCTCACG
TCCCGCCCCA GCGACCTATC GGCCGAAGAG AACGCCGTGT TCCTGAACCT GTATCTGGCG
GTCACCGAGG CCATCCGCGT GGACGGGTCG AACCGAAACA CCCTGGTGCT CATCGTCAAC
AAGGTCGCCG ACGTGCCCAG CTGGTTTTTC ACCAACAACC CCGAGGTCCG TTCAGTCATC
GTGCCGAACC CGGATCGCGA CACCCGCGCC GCCTTCGTGG ATTATGCCTT CTCGTCGCTT
TCCGACGACA ACCTGGAAGA CGTCCGCGAG AAGTTCATCG ACGTGACCGA CTCCATGAAG
GTACTCGAGC TCGACGAGTT GCGCCGCCTA CGCATCAAGG GCGACACGTC GCCCGAACAG
TTCCCCGAGC TGGTGGACAT CTACAAATAC GGCCTGAAGG AGAACAAGTG GGCGTCCATC
GTGGACAAGC TCCGCGATGA CCCCGAAGAG AAGCTCCGTC GCCGCGTCAA GGGTCAGGAC
CGCGCCTTGA GCAAGATAGT CACCGTGCTC AAGCGCAGCG TCATGGGCTT TTCCGGCATG
CAGCATTCAT CGGGCTCCAA GCCCAAAGGC GTGCTGTTTT TGGCAGGCCC CACAGGCACG
GGCAAGACCG AAGTGGTCAA GGCCGTCACC GAGCTCTTGT TCGGCGACGA GCGTAGCTAC
CTGCGTTTCG ACATGAGCGA ATACGCCTCC GAGAACTCCG ACCAGAAGCT GTTCGGTGCG
CCTCCGGGAT ACGTCGGATA CGAGGAAGGC GGTCAGCTGA CCAACGCCGT CAAGGCGAAC
CCCTTCTCGG TGCTGCTGTT CGACGAGGTC GAGAAGGCCC ACCCCTCCAT CATGGACAAA
TTCCTGCAGA TTCTGGAAGA CGGGCGCATG ACCGACGGCC AGGGCAACAC GGTGTATTTC
AGCGAGACGC TCATCTTCTT CACCAGCAAC GTAGGCATAT CTGAGGAGAT CCTAGACGAA
CACGGCCGCG CCGTCGGACG CCGCAACATC GTCGAGCCCG GCGAACCTTA CGAAGACATC
GAGCGCAAAG TATCCGAAGC CATGGCCATC CATTTCAAGC CGGAGGTGCT CAACCGCATC
GGCGACAACA TCGTGGTGTT CGACTACATC AGCCCCGAGG CGTCGTCGCT CATCGCACGC
TCGCAGCTGA AGAAGATCAA CGGCAACATC CTCAAGCGCC ACGAGATCCG CGTCACGCCG
ACCGATGCCT GTCTGGATTG GTTCTGCACC CACGCCCTTG ATGCTCCCGT CCGTGAGAAA
GGTGGCCGCG GTATCGGCAA CCTGATCGAG GCGAACTATT TGAATCCCCT GTCGAGTTAC
ATCTTCGACG CCCGAATCGA AGCCGGCCAG ACCGTGGTGG TTGACGCAGT CGACGACCAT
GTCACCTTCG CACGCGGCTC GGCAGACGAG GTGGCATGA
 
Protein sequence
MFTTPQWQKE IENFVGIKSA LIIEGNVFDL YPFLEGDDED DIEFLTLNEL LPRLFERGTA 
HAGESGRPYR FIYCDPLRGI SNPLGDADLA AITKAAAKEA DVLGRENESY NPNVGNDPNA
QSRLVQNSLL LRAALTRRID IPAMDNTPVA CVYSFASRLT SRPSDLSAEE NAVFLNLYLA
VTEAIRVDGS NRNTLVLIVN KVADVPSWFF TNNPEVRSVI VPNPDRDTRA AFVDYAFSSL
SDDNLEDVRE KFIDVTDSMK VLELDELRRL RIKGDTSPEQ FPELVDIYKY GLKENKWASI
VDKLRDDPEE KLRRRVKGQD RALSKIVTVL KRSVMGFSGM QHSSGSKPKG VLFLAGPTGT
GKTEVVKAVT ELLFGDERSY LRFDMSEYAS ENSDQKLFGA PPGYVGYEEG GQLTNAVKAN
PFSVLLFDEV EKAHPSIMDK FLQILEDGRM TDGQGNTVYF SETLIFFTSN VGISEEILDE
HGRAVGRRNI VEPGEPYEDI ERKVSEAMAI HFKPEVLNRI GDNIVVFDYI SPEASSLIAR
SQLKKINGNI LKRHEIRVTP TDACLDWFCT HALDAPVREK GGRGIGNLIE ANYLNPLSSY
IFDARIEAGQ TVVVDAVDDH VTFARGSADE VA