Gene Shel_14950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14950 
Symbol 
ID8395385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1717288 
End bp1717893 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID644986249 
Productpyruvate-formate lyase-activating enzyme 
Protein accessionYP_003143864 
Protein GI257064192 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.32642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTCG ACCGCGTCAT CAACAACATC GAAACGCTGG GGCCCGGCAG CCGCATCGTG 
GTCTGGACCG TCGGCTGCAG CAAGCGTTGT CCGGGTTGCG CGAACCCCGA GCTATGGGAG
GCGTCAGACG CGAACCGGAT TGACAACGAT CAGCTGGCCG AGGCGCTGGT GCGCATGGCG
AAGGCATCGG GCACGCGGGC TATCACCTTC ACAGGCGGAG ACCCCCTCGA ACAACCGGAC
GACCTTGCAT GGGTCCTTCG CTCCATACGC CCCGCATTCG ACGACGTCCT CGTCTACACA
GGCTATGTCG CCGAAGACGT GCAGGACCTC CTCGATTCCG AATTCGACGG CCTGATCGAT
GTCTTGATCG ACGGGCCGTA CGTCGAGAGC CTCAACGACG GCGTCTGCGC GCTTCGCGGC
TCCACCAACC AGCGGGTAAT GGTCCTCAAC CCTGTGCTTC AGGCCGCATA CGACGATGCG
CTGTCCGAAC CGAGGCGCGT GCAGAACCTG TATTTCGACA ACCGCGCCAT GTCCGTCGGC
ATACACAAGG TTGCGCAACG AATCCACGGC GATTGCCCTA CAATGGGTAC AAACGCACAG
GCGTAG
 
Protein sequence
MFVDRVINNI ETLGPGSRIV VWTVGCSKRC PGCANPELWE ASDANRIDND QLAEALVRMA 
KASGTRAITF TGGDPLEQPD DLAWVLRSIR PAFDDVLVYT GYVAEDVQDL LDSEFDGLID
VLIDGPYVES LNDGVCALRG STNQRVMVLN PVLQAAYDDA LSEPRRVQNL YFDNRAMSVG
IHKVAQRIHG DCPTMGTNAQ A