| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14870 |
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| Symbol | |
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| ID | 8395377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1709127 |
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| End bp | 1711709 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986241 |
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| Product | superfamily II RNA helicase |
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| Protein accession | YP_003143856 |
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| Protein GI | 257064184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.217671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.750505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCGAAACAAC CGCTTGGAAT CCCGAAGACG ACCCGCGCTC TCCAGGATAC
CTGGGACGTC TGGCCGACGA CCTGAACGCC CAGGAGACGC TTTCCCCCGA CGAGGTTTTC
GACGCGTTCA TCGAATGGAC CGAAGGGGTC GGATTCGACA TGTGGCCGCA CCAGGTGGAT
GCCTGCCTGA GCATCGCCGC AGGAAACCAC GTGATCCTGG GCACGCCCAC CGGATCGGGC
AAATCGCTGG TGGCCACGTT CATGCAGTTC CTATCGCTTG CCATGGGCTG CCGTTCGTAT
TACACGGCGC CGATCAAGGC TCTGGTCAGC GAGAAGTTCT TCAACATGGT GGAGCTTTTC
GGACGCGAGA ACGTAGGCAT GATCACAGGC GACGCCGCCA TCAACTCGGA TGCCCCGGTC
ATCTGCTGCA CGGCGGAGAT CCTCGCCAAC GACGCCCTCA GGCTGGGCGT GGACGCCCCC
ATCGACTACG TGGCCATGGA CGAGTTCCAT TTTTACGGCG AGCCCGACCG CGGGTGGGCA
TGGCAGGTGC CGCTGCTCAC CATGCCGAAG GCCCGCTTCA TGCTGATGAG CGCCACGTTG
GGTGACATGA CGTCCATCGC CGAGACCCTG GAACGCCAGA CGGGAAACGC CGTGGACGTG
GTGGACGACG CCGAACGCCC TGTGCCGTTG AGCTACGACT ACGTGGAATC GCCCTTGGAA
GCCACAGTGG AGCTTGCCAT CCGCGCAGGC GACGCACCCA TCTACATCGT CCACTTCTCC
CAGGACGCAG CCCTTTCGTC GGCGCAGGCC CTGATCAGCT TCGGTTTGGT GGACAAAGAG
CAGCGCGCGC TGATCAAGGA CGCCATCAAG GGAACCAAGT TCACCACCGC CTTCGGCAAG
ACGCTGCGGC GCCTGCTTGA AGCCGGCATC GGCGTCCACC ACGCTGGCAT GCTCCCCCGA
TACCGCCTTC TGGTCGAAAA GCTTGCCCAG CAGGGGCTGT TGCCCATCAT CTGCGGCACC
GACACCCTCG GCGTCGGCAT CAACGTGCCC ATCCACACCG TCATCCTCAC GGCGCTGTCC
AAGTTCGACG GAACCCGCAT GCGCAAGCTG AAGGCCCGTG AGTTCCATCA GATTGCAGGC
CGCGCAGGCC GCTCCGGATT CGATACGGAA GGCCTGGTCA TAGCCGAAGC ACCTGAACAC
GACATCGAGA ACGCGCGAGC CGTTGCCAAA GCCGCCGGCG ACCCGAAGAA GCTCAAGAAG
ATCAAGAAGA AGCAACCTCC GGAGGGCTTC GTCTCCTGGA ACAAGAAGAC CTTCGAGCGC
CTGATCGACG CGCCGCCCGA AACTCTCATA CCCCGCATGC GCATCACCCA CTCCATGGTG
CTTGCCGAGG TCATGCAGGG CGGCGACGCA TCCGCCCGCG TCCGCAAGCT CATTGCGGAT
TCGGCCCAGA ACGACGAGCA GAAGACGGCG CTGTACAACC GTGCGAACGA GGTGTTCCAA
ACCTTGATCG ATGCCGACGT GGTCGAACGC CATCCGACCG AAGACGGCGC TACCGAATAC
GCCCTGATGG TCGATTTGCC GGAGGATTTT GCACTAGACC AGCCCCTTTC GCCCTTCATG
CTGGCAGCGC TGGAACTTCT GGACCCCGAA AGCGATACGT ACGCGCTGGA CGTCATCTCC
ATGGTGGAGG CCACGCTGGA AGACCCGCGC CAGATTCTTC GTTCGCAGGA ACGCAAGGCG
AAGGATAAGG CCATGGCTCA GATGAAGGCC GATGGAATCG AATACGAGGA GCGCATGGAC
CGTTTGGCGG AGGTCACCTA CCCCAAACCG CTGGAAGATG TGCTCATCCC CGCGTTCCAT
CAGTACTGCA AGGCTGTACC ATGGGCCAAC GACTACGAGC TGCGTCCCAA GTCCATCCTG
CGGGACATGA TCGAGACGGC CTCGAACTTC AAGGAGTATA TCGGCCGGTA CGGCATCGCC
CGATGCGAGG GCCTGCTGCT GCGATACCTG TCCGACGCAT ACCGCGTTCT GGACCGCACG
ATTCCTTTCG AAAAGCGCGA CGACCGCCTG CTCGAGATCA TCGGATGGCT TCGCCTGGTG
GTCCGCTCCG TCGATTCCAG CTTGGTCGAC GAGTGGGAAT CGGCCGGCTC CACCTTCGAG
GAGGCGCCGC CCGAAGCTGC GGAAGCCGTG GTGCACGACC GTCGAGCCGT CACCCTGTTG
GTTCGGAACG CCCTGTTCCA ACGCATACGC CTTGCAGCGG CCGATCGCGC CTACGATCTC
GGCGAGCTCG ATGCGGAATG GGGTTTCGGG GAACGCACAT GGGGCCAGGT CCTGGACGAC
TACTTCGCCG AGCATGATGA GATTCTCATC GACGCCGACG CCCGAAGCGC CGCATACCTT
TCCATCGACG AGGCCAACGA GCACTTCAAC CATACCTGGC ATGTTCGCCA GACCTTCAAG
GACGAGGACG ACTCCCGGGA CTTCTTCATC GATGCCGACG TGGACCTGGA TGCCACGCAG
GAAGCGGGCG AGGTCATCTT CAAAAACTAC CAGGTCGGGT TCTTCGAGGA CCTCGACCTA
TAA
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| Protein sequence | MTDTETTAWN PEDDPRSPGY LGRLADDLNA QETLSPDEVF DAFIEWTEGV GFDMWPHQVD
ACLSIAAGNH VILGTPTGSG KSLVATFMQF LSLAMGCRSY YTAPIKALVS EKFFNMVELF
GRENVGMITG DAAINSDAPV ICCTAEILAN DALRLGVDAP IDYVAMDEFH FYGEPDRGWA
WQVPLLTMPK ARFMLMSATL GDMTSIAETL ERQTGNAVDV VDDAERPVPL SYDYVESPLE
ATVELAIRAG DAPIYIVHFS QDAALSSAQA LISFGLVDKE QRALIKDAIK GTKFTTAFGK
TLRRLLEAGI GVHHAGMLPR YRLLVEKLAQ QGLLPIICGT DTLGVGINVP IHTVILTALS
KFDGTRMRKL KAREFHQIAG RAGRSGFDTE GLVIAEAPEH DIENARAVAK AAGDPKKLKK
IKKKQPPEGF VSWNKKTFER LIDAPPETLI PRMRITHSMV LAEVMQGGDA SARVRKLIAD
SAQNDEQKTA LYNRANEVFQ TLIDADVVER HPTEDGATEY ALMVDLPEDF ALDQPLSPFM
LAALELLDPE SDTYALDVIS MVEATLEDPR QILRSQERKA KDKAMAQMKA DGIEYEERMD
RLAEVTYPKP LEDVLIPAFH QYCKAVPWAN DYELRPKSIL RDMIETASNF KEYIGRYGIA
RCEGLLLRYL SDAYRVLDRT IPFEKRDDRL LEIIGWLRLV VRSVDSSLVD EWESAGSTFE
EAPPEAAEAV VHDRRAVTLL VRNALFQRIR LAAADRAYDL GELDAEWGFG ERTWGQVLDD
YFAEHDEILI DADARSAAYL SIDEANEHFN HTWHVRQTFK DEDDSRDFFI DADVDLDATQ
EAGEVIFKNY QVGFFEDLDL
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