| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14820 |
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| Symbol | |
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| ID | 8395372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1702429 |
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| End bp | 1703772 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986236 |
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| Product | yjeF-like protein |
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| Protein accession | YP_003143851 |
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| Protein GI | 257064179 |
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| COG category | [L] Replication, recombination and repair
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG3663] G:T/U mismatch-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0790751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGCAT CGTCCGAACA TATCGTCCAC GAAATCGAGC CCGTGTTCGA CCGGCATTCG
CGCGTCCTTA TACTGGGAAC CATGCCCTCC CCCAAATCCC GTGAGGAAGG CTTCTTCTAC
GGGCATCCGC GCAACCGCTT CTGGACGGTG CTCGCCAGCC TGTTCCATGA GCCGGTGCCT
GCAACAAACC AGCGCAAACG CGACCTGCTG CTGCGCCACG GCATCGCGCT TTGGGACGTG
CTGGCATCCT GCGACATCGA AGGAGCTTCC GACGCGAGCA TCAAAAACGC GAAGCCGAAC
GACCTGACGC GCATCACCTC GGCAGCACCC ATCGAGGCCG TGTTCTGCAC CGGAGCCAAA
TCCGCCGAGC TTTACCGCCG CTACTGCGAA TCCCAAACGG GCATACCCGC AGTCCAGCTG
CCCTCGACCA GCCCCGCCAA TGCGGCTATG GATACCGAGA CCTTGACGGC CGCCTACCAG
GTCATTCTGG ACCACCTTGA AGCGCCCCGT CACGTGGCGC TTCATGTGCC TGAGGTCGTC
GCGCTCGAAC AGGCTATCGC CGCAGACGGA ACGTCTTTGG CCGAGCTTAT GGACCGGGCC
GGCGGATTCC TGGCGTTTTA CACCCACACG CTGCATCCGG AAGGCCGCAT TGCCGTTTTG
TGCGGGACGG GCAACAACGG AGGCGACGGT TGGGTCGCCG CCGGCTGGCT GGCCGAAGCA
GGCCATGACG TGGTGCTTAT AACCCCCAGA TCCGCCGACG AACTTCGTGC CGAACCCGCA
AAATCAGCTG CACAAAAGCT TATGCAGGCC TTGCCGGAAT CTTGCCGAAT CCTGATCGCC
CCCGAAGCCG ACGCGGTTGC GGCCGAGTTG AAGGCCGCCG ACGTCATAAT AGACGCCATC
CTCGGCACCG GTTTTTCGGG CGACTCCGTC AAGGAACCCT TCGCCCGATG GATTGAAGAA
GCGTGCGCAT GCCGCGAATC CGGAACCGCC GTCATCGCCG CCGACTGCCC CAGCGGATAC
TCGGCAGAAA CCGGCAAAGC GGCTTCGCCA TGCATCAAAG CCGACGAAAC GGTGACCATG
ATCACATCTA AGGTGGGATT GGAGCGCCCA TGGGCCTTCA CCTACTGCGG CAACGTAACC
GTGGCGCCCA TCGCCTACAC ACGGCCTTAT CTTGATGAAA CCCAGCCGGA CGAACCCGAG
GAGCAGCCGG CCGACGCACC AGCCCCAGGC AAACCCGACG AGCAGTTCCG CCGCCCTGAA
AACGAAGACG ACGACGGGTA CGATCCGTAT TCCGACCGTC CCGCAACCCC CGAGCCGCTG
TTCCAGCAAG ACCCCTGGAA CTAG
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| Protein sequence | MTASSEHIVH EIEPVFDRHS RVLILGTMPS PKSREEGFFY GHPRNRFWTV LASLFHEPVP
ATNQRKRDLL LRHGIALWDV LASCDIEGAS DASIKNAKPN DLTRITSAAP IEAVFCTGAK
SAELYRRYCE SQTGIPAVQL PSTSPANAAM DTETLTAAYQ VILDHLEAPR HVALHVPEVV
ALEQAIAADG TSLAELMDRA GGFLAFYTHT LHPEGRIAVL CGTGNNGGDG WVAAGWLAEA
GHDVVLITPR SADELRAEPA KSAAQKLMQA LPESCRILIA PEADAVAAEL KAADVIIDAI
LGTGFSGDSV KEPFARWIEE ACACRESGTA VIAADCPSGY SAETGKAASP CIKADETVTM
ITSKVGLERP WAFTYCGNVT VAPIAYTRPY LDETQPDEPE EQPADAPAPG KPDEQFRRPE
NEDDDGYDPY SDRPATPEPL FQQDPWN
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