Gene Shel_14670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14670 
Symbol 
ID8395357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1684020 
End bp1685195 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID644986221 
ProductUDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
Protein accessionYP_003143836 
Protein GI257064164 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0872844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.74023e-07 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTATCGA AGCTGCCACA TCTCCTGCTG CTCATGGCGG TTGCCTTTCT GGTGACCTAC 
GTCATGGTGC CCGTGGTCAA GCGCTTGGCC TTCAGGCTGA ATGCCATCGA CTACCCGGGC
TATCGCCGCG TGAACAAGAC GCCTATCCCG CGCATGGGCG GATTGGCCAT GTATACAGGC
GTTATGGCGG CTTTGCTGGT CGAATTCATA GGGGAGCAGT TCCTGGATTG GAACGTGTTC
TACCAGTCGG CGTTTACGCT GAGCGTGTTC TATCCTGGTG TTGTGCTGGG ATTCACAGCT
ATCGTCATCA CCGGTGTGAT CGACGACGTG AAGGCGTTGC GGCCTTTCCA TAAGATGATC
GGCCAGATTA TCGCTGCGGT CATTCTTGTT GCTTCGGGTA TTCTGCTGGA ATCGATCAAG
AACCCCTTCG GCGCAGGATT CATCACGTTC GGGTGGTTCG CCTATCCTTT GACGGTGCTG
TATCTAATGG CGTTCATGAA CGTCATCAAC CTGATCGACG GCTTGGACGG CTTGGCGGCT
GGCATCACGG CCATCGCCAC GTTCACGCTG TTTTTGGTCG CGCTGGGCAA GTTTCGTATG
GAAACGGCCA TGTTCTGCGT CGTTACCCTG GGCGTCACGT TGGCGTTCTT GCGGTACAAC
TTCAACCCTG CAAGCATATT CATGGGAGAC TCGGGGTCGT TGTTCCTAGG AACCATGCTG
GGCGTCATCT CGCTTCTGGG CGTGATCAGG TCGTCGACCG TGGTCGTTCT GGCGGCGTCG
CTCATCATCG CGGCCATTCC CATTATGGAC TCGGTGGTTG CGGTCATCCG AAGGGTTCTG
GCGCATCAGC CCATCCAGCA GGCTGACGCG AAGCACCTGC ATCACAAGCT GCTGCGCGAA
GGCTACTCCA TGCGCACGTC GGTGTTGATC CTGTACGCTT GGACAGCGTT TCTTGCCATC
GGTGCATTCG CCATTTCGAA TACGGCAGGC ATGCTTGTTT TCGTCGTGTT CGTCATTCTG
GCGATCGGGT CGTTTATGAT TGTATGGCGG CTGGGTATTC TTGAACCCGT GCTGCGCCAC
TATTACAATA AGCGGATAGG CCGCATTCCG TCATCCCACA GGCATGGCGG AAAGAAGCCG
GAAGAAGTCG AGAAGGCTGC ACCGAAGGAC AACTAG
 
Protein sequence
MVSKLPHLLL LMAVAFLVTY VMVPVVKRLA FRLNAIDYPG YRRVNKTPIP RMGGLAMYTG 
VMAALLVEFI GEQFLDWNVF YQSAFTLSVF YPGVVLGFTA IVITGVIDDV KALRPFHKMI
GQIIAAVILV ASGILLESIK NPFGAGFITF GWFAYPLTVL YLMAFMNVIN LIDGLDGLAA
GITAIATFTL FLVALGKFRM ETAMFCVVTL GVTLAFLRYN FNPASIFMGD SGSLFLGTML
GVISLLGVIR SSTVVVLAAS LIIAAIPIMD SVVAVIRRVL AHQPIQQADA KHLHHKLLRE
GYSMRTSVLI LYAWTAFLAI GAFAISNTAG MLVFVVFVIL AIGSFMIVWR LGILEPVLRH
YYNKRIGRIP SSHRHGGKKP EEVEKAAPKD N