Gene Shel_14640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14640 
Symbol 
ID8395354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1680715 
End bp1682328 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content58% 
IMG OID644986218 
Productglycosyl/glycerophosphate transferase, teichoic acid biosynthesis 
Protein accessionYP_003143833 
Protein GI257064161 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00366623 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.65277e-07 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACTCG CACGGTATTG GTGGGAACGC ACCATCCTGT TCCTCGAAGT TGACCCCGCC 
ACGCCCTTTG CGGCCGATGA GAAACTGTAT CTGCAGCTCA TTCCTGCAGA CGATTCCGAA
GCACCCGAAC CTTTCGCGGT TGATAACTGC GCACGGATCT CCGACACGGT CATGTCCGTG
CGCTTCCTCA TGGGCGTCGC GAACGACCCG GTGCCTGCAG GCACCTACCG TGCCCTTGTG
CAGCGCGACG GAGCATTCAC GCCCGTCGAC GTTTCCGAAA TAGGCATTCC GCTGCTTTCG
CTGGACAACA AGCGCTCAGA CGTGTTCCTG TACATTCGTG CCGAATGCTA CTATGCAGCC
GTCCCCGTCG ATCGCGACGG AGAGCTCGCT TTCAAGGTCA CGAGCAAAGC CGCCCCGGGC
CACAAGCCTT CGGCCCATTA CAGCAACAAG GCCGAAATCG CCGAGAACCA TCGGCTCCTG
ATCCACAACT ACAAAGCAGG GCTGCTCATC TCGTTCTTCA ACTTCTTCAA GAAGACATGC
AGGGTCAACC CCAAAAAGAT CCTATTCACT TCAGACAGCC GGGCCAACCT GTCCGGCAAC
ATGGAGCCAC TGTATAAGCG CATGCAGGAA CGCGGCATTA CCGACAACTA CAAGGTCGTG
TTCTCGTTTA AAGAGGATGC CGTGCATCGC CGCAGTTTGT GGTCGCTCAT CAACCTGCAT
TACCATCTGG CCACGTCGAA GCTCATTTTC TGCGACGACT ACCAGTCGAT GCTGTACCGC
CTGAACTATA GGCCCGAACA GCGTCAGATC CAGCTTTGGC ACGCATGCGG CCATTTCAAG
ACGGTCGGAT TGGGGCGCAT CGGCACGCTT GCAGCCGTCT CGCCTTTCAA CATCAGCCAT
CGCACCTACA CCGACGTCAT TGTGGCATCT GACAGCGACG TGCCCATCTA CGGTGAAGCC
TTCGGCATCC CCGACAACCG CGTGAAGCCC TTAGGCATCC CCCGCCACGA CTGGCTGCTG
GACAAGGATT GGCAGGCCGA AAAGAAGAAG ACCTTCCAGG AGACCTTCCC CAACGCCGAC
GGCAAACGCG TGGTGGTGTT CGCCCCGACG TTCCGTGGCG AAGGCCGTCG CACCGCCTAC
TACGATTACG ACCTGCTGCA GCCCGAACGG CTGGCGCAGT TCTGCCGCGA GCACAACCTG
TTCTTCATTT TCAAGATGCA CCCTTTCGTG CTGCAGGAGC CGCCCATCCC CGCGGGCTGC
GACGATGTGT TCGCCAACGG AACGCCAATT CGCGAGATCA ACGACATTCT GCCCAGCACC
GACATCCTGA TCACGGATTA CTCCTCTGTC GTTTATGAAG CGTCGCTTTT GGGCATCCCC
ACGCTCTATT ACGCCTTCGA CAAGGAGGAA TACATCAGCG AGCGCGACTT CTACGAGTCC
TACGACGATT TCGTCAGCGG CAAGATCGTC TACACCTTCG ACGAGCTGCT CGACGCCATC
GCCAACGAGG ACTTCGAGCT GGAAAGGCTC CAGGATTTCG TCCGCAAGAA CTTCAAGCAC
ATCGACGGTC ACGCCTGCGA CCGCATCATC GACGAAACCA TCCTGAAGGC CTAG
 
Protein sequence
MKLARYWWER TILFLEVDPA TPFAADEKLY LQLIPADDSE APEPFAVDNC ARISDTVMSV 
RFLMGVANDP VPAGTYRALV QRDGAFTPVD VSEIGIPLLS LDNKRSDVFL YIRAECYYAA
VPVDRDGELA FKVTSKAAPG HKPSAHYSNK AEIAENHRLL IHNYKAGLLI SFFNFFKKTC
RVNPKKILFT SDSRANLSGN MEPLYKRMQE RGITDNYKVV FSFKEDAVHR RSLWSLINLH
YHLATSKLIF CDDYQSMLYR LNYRPEQRQI QLWHACGHFK TVGLGRIGTL AAVSPFNISH
RTYTDVIVAS DSDVPIYGEA FGIPDNRVKP LGIPRHDWLL DKDWQAEKKK TFQETFPNAD
GKRVVVFAPT FRGEGRRTAY YDYDLLQPER LAQFCREHNL FFIFKMHPFV LQEPPIPAGC
DDVFANGTPI REINDILPST DILITDYSSV VYEASLLGIP TLYYAFDKEE YISERDFYES
YDDFVSGKIV YTFDELLDAI ANEDFELERL QDFVRKNFKH IDGHACDRII DETILKA