Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14610 |
Symbol | |
ID | 8395351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1676839 |
End bp | 1678365 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644986215 |
Product | predicted membrane protein involved in D-alanine export |
Protein accession | YP_003143830 |
Protein GI | 257064158 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1696] Predicted membrane protein involved in D-alanine export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000798239 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTATTTT CGTCGTCTGC TTTTCTGCTG TTCTATTGCC CGATCATGCT GCTGGTGTAC TTTGCCTGTA GAACGCGGGT CCTTCGCAAT GTGTGGCTGC TCGTGGCATC GCTCTTGTTC TATTCCTGGG GAGAGCCCGT CTACGTCTTG CTTATGGTGC TTTCCATTTT CATGAATTGG GCGTTGTCGC TTGCGATAGG CGGCTCTTCG AAGGTCGGCG TACGAAAAGC CTTGCTGTTT ATTGCGGTCG TCGCAAACGT TCTGGTAATC GGATTCTTCA AATACCAGGG GTTTGTGGCA GATAACATCA ATGCGCTTGC GGGTGCTGAA GTCATCGGAA ACATGAACCT TCCGCTTCCT ATCGGCATTT CGTTTTACAC GCTGCAAGCC CTCTCATACG TCATCGATGT GTACCGTAAG CAGGTGGAAC CGCAACGCAA CATTCTCTTT TTGGGAATGT ACGTCGCCTG CTTCCCGCAG CTTATCGCCG GGCCCATCGT GCGGTACTCC ACCATTCATG AGCAGGTTCT AGGCCGTAAA GAAAACCTGG AAGACTTTGC TAGCGGGTTG CGCCTTTTCG TCGTGGGCCT GAGTAAAAAG GTGCTCCTTG CGAACACCTG CGCGATACTC GCCGATTCGA TGCTGTCCCA GGGCGGTTCT GCAATCGGGT TCGTGGGAGC CTGGGGCGGT CTGATCGCCT ATACGTTCCA GATATTCTTC GACTTCAGCG GGTATTCGGA TATGGCCATC GGCCTTGGTC GCATGATGGG ATTCAAGTAT CTGCGCAACT TCAATTATCC CTACATTTCA ACATCGGTTA CTGAATTCTG GCGTCGTTGG CACATCAGCC TGTCGACGTT CTTTCGCGAT TACATCTACA TCCCTTTGGG CGGCAGCCGA TGCACTACCA GCAGGCACAT ATTCAATATC GCCGTTGTAT GGACCGTTAC CGGCCTTTGG CACGGCGCCG CTTGGAACTA CGTGCTGTGG GGCGTGTACT ACGGCGTGCT TCTGATATGC GAGAAGTACC TTTGGGGCAT GCGTTTGGCG AAAACGCCCA GACTGGTTCA GCACGTGTAC TGCATCGTCA TTTACGTGTT CGGTTGGTCG TTCTTTTGGA TTACGGATTC AACGCAGCTC GTGCCGTATT GGCAGGCACT GGTCGGGATG TACGGCCTTA CGGGTTCTGC ATCGTTTTGG GAGCTGGGCG TTTGGGAGTA TTGGGTTGTG TTCGCAATTT GCGTCGCAGC GTCCACTCCG ATATGCCCGT ATGTGAAGGA GCGTTTCCTG GCTTGGGTCG AAGGTCGGCA GCTCGTCGAT TTCCTCAAGA TCAGCGTTGT GAACCCTGAA AGGTACGAAG CCGATTCGCT GTGCGTGCTG GAAGCGGAGC CGGTAGGGAA GAGCCAGGCG CGTCTGCTCG CATGGGCGAA CGTTGCGGTC GATGTGCTGC TGGTCATGCT TTTCCTGACC AGTCTGGCTT CGGTCATTTC CGGCTCGTTC AACCCGTTCA TTTATTTCCA GTTCTAA
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Protein sequence | MVFSSSAFLL FYCPIMLLVY FACRTRVLRN VWLLVASLLF YSWGEPVYVL LMVLSIFMNW ALSLAIGGSS KVGVRKALLF IAVVANVLVI GFFKYQGFVA DNINALAGAE VIGNMNLPLP IGISFYTLQA LSYVIDVYRK QVEPQRNILF LGMYVACFPQ LIAGPIVRYS TIHEQVLGRK ENLEDFASGL RLFVVGLSKK VLLANTCAIL ADSMLSQGGS AIGFVGAWGG LIAYTFQIFF DFSGYSDMAI GLGRMMGFKY LRNFNYPYIS TSVTEFWRRW HISLSTFFRD YIYIPLGGSR CTTSRHIFNI AVVWTVTGLW HGAAWNYVLW GVYYGVLLIC EKYLWGMRLA KTPRLVQHVY CIVIYVFGWS FFWITDSTQL VPYWQALVGM YGLTGSASFW ELGVWEYWVV FAICVAASTP ICPYVKERFL AWVEGRQLVD FLKISVVNPE RYEADSLCVL EAEPVGKSQA RLLAWANVAV DVLLVMLFLT SLASVISGSF NPFIYFQF
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