| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14450 |
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| Symbol | |
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| ID | 8395335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1653646 |
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| End bp | 1655244 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644986199 |
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| Product | glucan-binding domain-containing protein |
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| Protein accession | YP_003143814 |
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| Protein GI | 257064142 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.521361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGTGA AGCAACAGAA CGCCAACGTT GCGCTTCGTT TGGCTTTGGC TTCTCTTCTC
GCGACTGTGG CGGTTGCGTT CGTCTGCGGC ATGACTTCTG TTCAGGCTTT TGCCGATGAA
GTCGCTGCCG ACGGCCAAAC GGACCTTGCT GCCGAAGCCA CTCTCGACGA AGCTGCGGAG
CCTGCTGAAG GGACGCTTGA GACCGAAGCC GGCATGGTTG GCGAAGATGC CGAAGGCGTT
GTAGCCGACA TCGAAAACGC TGAAGATGCC GATGCCGTCC AGGAACCTGA GGTTGAGGCT
CCTGCCGAAG CCGCTGTTGA GGAAGATGGG TCTGAAGATA CCGTACAAAC CCTCACAGAT
CCCGAAGAGG AAGAGCTTAC CCCTGGTTGG CACGACACCG AAGACGGCAC CGGAAAGTTC
TACGTGCTTG AGGACAAGAC GAAGGCCAAG GGCTGGCAGG ACATCGACGG CAAGCGCTAC
TACTTCGACA CCGAGACCGC CATCATGAAG ACCGGCTGGC TGGACGATGC CGGCACGTGG
TACTACCTCG ATACTAAGAC CGGCATCATG AAGACCGGTT GGGTGAAGAG CGGTTCCAAG
TGGTACTTCA TGAGCGATCC CGATGGAGCC ATGAAGACCG GCTGGGTTAA GGACAAGGGT
CTTTGGTACT ACATGGATTC CCCTTCCGGC GTTATGCAGA AGGGCCTTAT CTCCGTCAAT
GGCAAAACGT ATTATATGAA CGGCAGCGGC GCCATGCAGA CCGGCTGGAA GAAGGTCGAC
GGTTCGTGGT ACCACTTCGA TTCCAAGAGC GGCGCCGCAT CGACCGGTTG GGTACATGAC
GGCTCCGACT ATTACTTCAT GAATGGCGAC GGCACCATGA AGACCGGCTG GATGAAAGAA
GGAACCACCT GGTACTACTT CAAGGGGTCT GGCCGCATGG CTTACGACCA GTGGATTCAG
GACGGCAGCG ATTGGTACCA TTTCGCTGCG AGCGGCGCCA TGCAGAAGGG CTGGAAGCAG
ATCAAAGGCT CTTGGTACTA CTTCCGCGAC AGCGGCCGCA TGGTGAACAG CCAGTGGCTG
AAGGTGAAGA ACGACTGGTA CTACTTCTAC TCCAGCGGTG CCATGGCATC CAACACCTAC
GTGGGCAATT ACTATGTGAA TGCTAACGGA AAGTGGGTTA AGGACACGAA CCTTGCCAAG
GCGAACTCCC TGTACAGCGC TACGAATTGG GTGGTCATTA TCGACACCCA TAAGAATTGG
ATTTACATCT ACAAGGGTCC CAACGGCAAC CGTTACCTGT ATGATTACTG GCGCGTTTCC
ACCGGAGCCG CCGCGACGCC TACCGTGAAG GGAGAATTCA CCGTAGGCAG CAAGGGTTAC
TCCTTCGGCA ACCAGTACTA TCAGTGCTAC TACTACACGC AGTTCTTCAA CGACTACCTG
ATGCACTCCA TCCTGTACTA CAGCAGGCCT TCCGCAGATG ACGTGAAGGA CGGACGCATG
GGCATGAACA TCTCGCACGG TTGCGTTCGT ATGCCGATCG AGCGTGCTAA ATGGATTCAG
AACAACATTC CATATGGCAC AAAGGTGTAC ATCTACTAA
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| Protein sequence | MYVKQQNANV ALRLALASLL ATVAVAFVCG MTSVQAFADE VAADGQTDLA AEATLDEAAE
PAEGTLETEA GMVGEDAEGV VADIENAEDA DAVQEPEVEA PAEAAVEEDG SEDTVQTLTD
PEEEELTPGW HDTEDGTGKF YVLEDKTKAK GWQDIDGKRY YFDTETAIMK TGWLDDAGTW
YYLDTKTGIM KTGWVKSGSK WYFMSDPDGA MKTGWVKDKG LWYYMDSPSG VMQKGLISVN
GKTYYMNGSG AMQTGWKKVD GSWYHFDSKS GAASTGWVHD GSDYYFMNGD GTMKTGWMKE
GTTWYYFKGS GRMAYDQWIQ DGSDWYHFAA SGAMQKGWKQ IKGSWYYFRD SGRMVNSQWL
KVKNDWYYFY SSGAMASNTY VGNYYVNANG KWVKDTNLAK ANSLYSATNW VVIIDTHKNW
IYIYKGPNGN RYLYDYWRVS TGAAATPTVK GEFTVGSKGY SFGNQYYQCY YYTQFFNDYL
MHSILYYSRP SADDVKDGRM GMNISHGCVR MPIERAKWIQ NNIPYGTKVY IY
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