Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14180 |
Symbol | |
ID | 8395308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1618253 |
End bp | 1620133 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986172 |
Product | Fe-S oxidoreductase |
Protein accession | YP_003143787 |
Protein GI | 257064115 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAACCG ATTTGTGGCC GCAGGTGGAG CGCCTGCTGC GCGAGTCAGG CCGGTCCATC GAGCGGCCTA CCCGTTATTT GAATCATGAG TGGGGCTGCA CCTACAAGCC CGACGCTGCA TACCGCTTCT GCATGGTGTA TCCCGATACT TACGAGCTGG GCCAGGCCAA CCAGGCGGTA CGCATCCTGT GCAACCGAGT CAACCTGGTG GAAGGCATGG CGGCTGAACG CGCCTACGTG CCTGCCGACG ACATGGCGGA CGCCATGCGC GCGGCGGGCA TTCCGGCGTT CTCTATGGAA AGCTGTGCGC CCATCGCCGA ATTCGATGCT GTGGGTATCA CACTTCCTCA TGAGCTGGCC GCCACCAACG TGCTGCAGCT GCTCGATCTG GCGGGAATTC CGCTTCGGAC TGAAAACCGC ACAGAAAACG ATCCGCTCGT CATGGGCGGC GGCCCCTGTG TGCTGAACGC GGAGCCCTAC GCCCCGTTTT TCGACGTGCT GATGCTCGGC GAAGGCGAGG AGGTACTGCC TGAGCTCCTG CGAATGCACC GCGACATGCT GGCCCAAGGC GTGTCCCGGG CCGATATGCT GCATGCCATG GCGAAGGTGC CGGGCGTGTA CGTGCCTTCT CTTTATGATG TGGTGTCGGA AGCGGAAGCC CAGGAGCGCG GCAGCTGGAT CGTCCCGAAA TACGACGACA TCCCAACCGT CATCGAGAAG CGGATCTGGG AGGGTTTCGC CACGTCGGAT GCCTACGAGC CTCAGGTCGT ACCTTACGCG GAGCTCATTC ACGACCGTTT GAACATCGAG ATTCTACGCG GCTGCACCCG CGGCTGTCGT TTCTGCCAGG CGGGCATGAT GTACCGTCCG GTGCGCGAAC GTTCGGCTGA CAACATTGTC GCCGCCGCAA TCCGCGGCCT TTCCGAAACG GGATACGACG AAGTGAGCCT GACCTCGCTT TCAACCACGG ACCACAGCCA GATCGAGGAT ATCCTTCGCC GCTTGAACAG GACGTTCGAA GGCACGGGCA TCTCCGTGAG CATCCCGAGC CAGCGCCTGG ACTCCTTCGG CGTGGACATG GCCGAACTTG TGGCAGGCGG CAAGCGCGGT GGACTCACTT TCGCCCCTGA GGCCGGCACG CAGCGTCTTC GCGACGTCAT CAACAAGAAT GTTACGGAAG AGGACCTGTT CACAGCTGTA AGGGCTTCGT TTGAAGCCGG ATGGCGCCGC TGCAAGCTCT ATTTCATGAT CGGCCTTCCT ACGGAGACCG ACGACGACAT AAAAGGCATC GCCAGCCTGG TGCAGCGAGC GTATGACGTG GCCAAACAGG CAACGCCGGA AGGGCAGCGC GGCAACATCC GCATGAGCGC ATCATGCGCC CTGTTCGTGC CGAAGGCCCA GACGCCGTTT CAGTGGGACG GCCAGATTGC GCCCGAAGAG GCAATCCGCC GCATCAACTT GCTTCGAAAC TCCGTCAAGT ACCGTGCAAT CGACATCCAT TGGCACGCGC CCGATGTCTC GCAGGTGGAA GCCATGATGA GCCGCGGCGG TAGGGAAGTA GCCGATGTCG TTGAGGCGGC TTGGCGAAAA GGCGAGCACT TCGACGCGTG GACCGAGAAG TTCTCCTTGG ATGCGTGGAA GGAAGCGTGT GCCGAGTGCG GCGTTGATTT CGAAGGCACC GCGCAGCGCA CCTACGACAC TGATTACATT CCGCCCTGGG CGCATCTTTC CTTGGGCATA CAGACACGGT ATTTCCAGCG GGAACGCCAG CTTGCCGACG AAGCCAAAAC CACGCCGGAT TGCACCTATG AGCACTGCAC GGTGTGCGGC GTGTGCATGG GCCTGGGTTC CAAGATCCAG TTGCAGGGGG TGCGCTCATG A
|
Protein sequence | MTTDLWPQVE RLLRESGRSI ERPTRYLNHE WGCTYKPDAA YRFCMVYPDT YELGQANQAV RILCNRVNLV EGMAAERAYV PADDMADAMR AAGIPAFSME SCAPIAEFDA VGITLPHELA ATNVLQLLDL AGIPLRTENR TENDPLVMGG GPCVLNAEPY APFFDVLMLG EGEEVLPELL RMHRDMLAQG VSRADMLHAM AKVPGVYVPS LYDVVSEAEA QERGSWIVPK YDDIPTVIEK RIWEGFATSD AYEPQVVPYA ELIHDRLNIE ILRGCTRGCR FCQAGMMYRP VRERSADNIV AAAIRGLSET GYDEVSLTSL STTDHSQIED ILRRLNRTFE GTGISVSIPS QRLDSFGVDM AELVAGGKRG GLTFAPEAGT QRLRDVINKN VTEEDLFTAV RASFEAGWRR CKLYFMIGLP TETDDDIKGI ASLVQRAYDV AKQATPEGQR GNIRMSASCA LFVPKAQTPF QWDGQIAPEE AIRRINLLRN SVKYRAIDIH WHAPDVSQVE AMMSRGGREV ADVVEAAWRK GEHFDAWTEK FSLDAWKEAC AECGVDFEGT AQRTYDTDYI PPWAHLSLGI QTRYFQRERQ LADEAKTTPD CTYEHCTVCG VCMGLGSKIQ LQGVRS
|
| |