Gene Shel_14180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14180 
Symbol 
ID8395308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1618253 
End bp1620133 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content61% 
IMG OID644986172 
ProductFe-S oxidoreductase 
Protein accessionYP_003143787 
Protein GI257064115 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACCG ATTTGTGGCC GCAGGTGGAG CGCCTGCTGC GCGAGTCAGG CCGGTCCATC 
GAGCGGCCTA CCCGTTATTT GAATCATGAG TGGGGCTGCA CCTACAAGCC CGACGCTGCA
TACCGCTTCT GCATGGTGTA TCCCGATACT TACGAGCTGG GCCAGGCCAA CCAGGCGGTA
CGCATCCTGT GCAACCGAGT CAACCTGGTG GAAGGCATGG CGGCTGAACG CGCCTACGTG
CCTGCCGACG ACATGGCGGA CGCCATGCGC GCGGCGGGCA TTCCGGCGTT CTCTATGGAA
AGCTGTGCGC CCATCGCCGA ATTCGATGCT GTGGGTATCA CACTTCCTCA TGAGCTGGCC
GCCACCAACG TGCTGCAGCT GCTCGATCTG GCGGGAATTC CGCTTCGGAC TGAAAACCGC
ACAGAAAACG ATCCGCTCGT CATGGGCGGC GGCCCCTGTG TGCTGAACGC GGAGCCCTAC
GCCCCGTTTT TCGACGTGCT GATGCTCGGC GAAGGCGAGG AGGTACTGCC TGAGCTCCTG
CGAATGCACC GCGACATGCT GGCCCAAGGC GTGTCCCGGG CCGATATGCT GCATGCCATG
GCGAAGGTGC CGGGCGTGTA CGTGCCTTCT CTTTATGATG TGGTGTCGGA AGCGGAAGCC
CAGGAGCGCG GCAGCTGGAT CGTCCCGAAA TACGACGACA TCCCAACCGT CATCGAGAAG
CGGATCTGGG AGGGTTTCGC CACGTCGGAT GCCTACGAGC CTCAGGTCGT ACCTTACGCG
GAGCTCATTC ACGACCGTTT GAACATCGAG ATTCTACGCG GCTGCACCCG CGGCTGTCGT
TTCTGCCAGG CGGGCATGAT GTACCGTCCG GTGCGCGAAC GTTCGGCTGA CAACATTGTC
GCCGCCGCAA TCCGCGGCCT TTCCGAAACG GGATACGACG AAGTGAGCCT GACCTCGCTT
TCAACCACGG ACCACAGCCA GATCGAGGAT ATCCTTCGCC GCTTGAACAG GACGTTCGAA
GGCACGGGCA TCTCCGTGAG CATCCCGAGC CAGCGCCTGG ACTCCTTCGG CGTGGACATG
GCCGAACTTG TGGCAGGCGG CAAGCGCGGT GGACTCACTT TCGCCCCTGA GGCCGGCACG
CAGCGTCTTC GCGACGTCAT CAACAAGAAT GTTACGGAAG AGGACCTGTT CACAGCTGTA
AGGGCTTCGT TTGAAGCCGG ATGGCGCCGC TGCAAGCTCT ATTTCATGAT CGGCCTTCCT
ACGGAGACCG ACGACGACAT AAAAGGCATC GCCAGCCTGG TGCAGCGAGC GTATGACGTG
GCCAAACAGG CAACGCCGGA AGGGCAGCGC GGCAACATCC GCATGAGCGC ATCATGCGCC
CTGTTCGTGC CGAAGGCCCA GACGCCGTTT CAGTGGGACG GCCAGATTGC GCCCGAAGAG
GCAATCCGCC GCATCAACTT GCTTCGAAAC TCCGTCAAGT ACCGTGCAAT CGACATCCAT
TGGCACGCGC CCGATGTCTC GCAGGTGGAA GCCATGATGA GCCGCGGCGG TAGGGAAGTA
GCCGATGTCG TTGAGGCGGC TTGGCGAAAA GGCGAGCACT TCGACGCGTG GACCGAGAAG
TTCTCCTTGG ATGCGTGGAA GGAAGCGTGT GCCGAGTGCG GCGTTGATTT CGAAGGCACC
GCGCAGCGCA CCTACGACAC TGATTACATT CCGCCCTGGG CGCATCTTTC CTTGGGCATA
CAGACACGGT ATTTCCAGCG GGAACGCCAG CTTGCCGACG AAGCCAAAAC CACGCCGGAT
TGCACCTATG AGCACTGCAC GGTGTGCGGC GTGTGCATGG GCCTGGGTTC CAAGATCCAG
TTGCAGGGGG TGCGCTCATG A
 
Protein sequence
MTTDLWPQVE RLLRESGRSI ERPTRYLNHE WGCTYKPDAA YRFCMVYPDT YELGQANQAV 
RILCNRVNLV EGMAAERAYV PADDMADAMR AAGIPAFSME SCAPIAEFDA VGITLPHELA
ATNVLQLLDL AGIPLRTENR TENDPLVMGG GPCVLNAEPY APFFDVLMLG EGEEVLPELL
RMHRDMLAQG VSRADMLHAM AKVPGVYVPS LYDVVSEAEA QERGSWIVPK YDDIPTVIEK
RIWEGFATSD AYEPQVVPYA ELIHDRLNIE ILRGCTRGCR FCQAGMMYRP VRERSADNIV
AAAIRGLSET GYDEVSLTSL STTDHSQIED ILRRLNRTFE GTGISVSIPS QRLDSFGVDM
AELVAGGKRG GLTFAPEAGT QRLRDVINKN VTEEDLFTAV RASFEAGWRR CKLYFMIGLP
TETDDDIKGI ASLVQRAYDV AKQATPEGQR GNIRMSASCA LFVPKAQTPF QWDGQIAPEE
AIRRINLLRN SVKYRAIDIH WHAPDVSQVE AMMSRGGREV ADVVEAAWRK GEHFDAWTEK
FSLDAWKEAC AECGVDFEGT AQRTYDTDYI PPWAHLSLGI QTRYFQRERQ LADEAKTTPD
CTYEHCTVCG VCMGLGSKIQ LQGVRS