| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13230 |
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| Symbol | |
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| ID | 8395214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1510787 |
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| End bp | 1514068 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986079 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_003143696 |
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| Protein GI | 257064024 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.94923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.975818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGC GTACCGACAT CAAGCGAATC CTCGTTATCG GGTCCGGCCC CATCGTCATC
GGCCAGGCCT GCGAATTCGA TTATTCCGGC ACCCAGGCCT GCAAGGTGCT GCAGGAGGAA
GGCTACGAGG TCGTCCTGGT CAATTCCAAT CCGGCAACCA TCATGACCGA CCCGCAGCTG
GCCGACCGCA CATACGTCGA GCCCATTACG CCTGAGTTCG TGGAGAAGAT CATCGCCAAG
GAACGCCCCG ACGCGCTGCT GCCCACCATC GGCGGCCAGA CTGGCCTGAA CACCGCAGTT
GAGCTGGCCA AATCCGGCGT GCTTGACAAG TACGGCGTGG AGATGATCGG CTGCGACCTG
GATGCCATCG AGCGCGGCGA GGACCGCAAG CTCTTCGCCG AGGCCATGGA GGAGATAGGT
CTGGAATGTG CCCGCAGCGG ATACGCCTAC AGCGTGGAAG ACGCCGTGGA GCTTTCGAAG
TCCATCGGGT TCCCGTTGGT CTTGCGCCCT TCGTTCACGC TTGGCGGCGC AGGCGGCGGC
ATCGCCTACG ACGAGAAGCA GCTGCGTGAA ATCGTGGCGC AGGGCCTCGA GCTTTCGCCG
GCCAACGAGG TGCTGGTGGA GGAGAGCATC ATCGGTTGGA AAGAGTACGA GATGGAGGTC
ATGCGCGACC GTGCCGGCAA CGGCATCATC GTATGCTCCA TCGAGAATTT CGACGCCATG
GGCGTGCATA CCGGCGACTC CATCACGGTG GCCCCGGCGC AGACCCTTTC CGACGTTGAA
TACCAGCGCA TGCGCGTGGC CTCGCTGGCC ATTCTGGAGA AGGTGGGCGT CGAGACCGGC
GGGTCCAACG TCCAGTTCGC GCTGAACCCC GACAACGGAC GCTTGATCGT CATCGAGATG
AACCCACGCG TGTCCCGCTC TTCGGCGCTG GCGTCGAAGG CGACCGGCTT CCCGATCGCC
AAAGCCGCGG CGCGTCTGGC CGTGGGCTAC ACGCTCGACG AGATCATCAA CGACATCACG
CTGGCAACCC CTGCATGCTT CGAGCCTTCC ATCGACTACT GCGTAGTCAA GGTGCCGCGC
TTCGCCTTCG AGAAGTTCAA GGGCACCGAC ACCACGCTGT CCACCCGCAT GAAGGCCGTA
GGCGAGATCA TGGCCATCGG CCGCACCTTC GAGGAATCCT TCGGCAAGGC CATGCGTTCG
CTTGAGAACG GACGCGCCGG CCTGGGCGCC GACGGCAAGG ACTCCTTCGA TGAGGAGCAT
TTCGACGAGT ACGTAGCTCG TCCGACCGAG GACCGCATCT TCTACATGGC CGAGGCGCTG
CGCCGTGGCT GGACCGTCGA GCAGCTGCAT GAGGCAACCG GCATCGACGA GTGGTTCCTC
TGGCGCATGA AAGACATCAT CGCGGTCGAA CAGGCCCTGA AGGGGCACAG GCTGGAGGAA
ATCGACGCCA AAGCCATGCG CGTGGCCAAG CAGTACGGCC TGTCCGACGC GCAGATCGGC
TATCTGACCA GCAGCGAAGA GAAGGTCGTG CGCGCGTACC GCAAGGGCTT GGGCGTCATT
CCCACGTTCA AGACCGTGGA CACCTGCGCC GCAGAGTTCG CCAGCAAAAC CGAATACCAT
TACAAGACCT ACGAGGATCC GTACCGCGCC GCCGGCTCCG ACGGCTGGTA CGAGGCTCCC
GCGGAAATCG CCCATACCGA CAAGCCCAAG GCCATGATCT TGGGCGCGGG TCCCAACCGC
ATCGGCCAGG GCATCGAGTT CGACTACTGC TGCGTGCATG CTGCCTACGC GCTGCATGAC
GCCGGATTCG AGACCATTAT GGTCAACTGC AACCCCGAAA CCGTGTCCAC CGACTACGAC
ACCTCCGACC GTCTGTATTT CGAGCCTCTG ACCTACGAAG ACGTGATGGA CATTGTGGAC
GTGGAGCGTC CTGACGGCGT GGTGGTCACC CTGGGCGGCC AGACTCCGCT TAAGCTGGCC
CGTGCGCTTG CCGATTCCGG CGTGCCCATC ATGGGTACCC AGCCCGAAGC CATCGACCTG
GCGGAAGATC GCGAACGCTT CTCGGCGATC CTCGACGAGC TGAAGATCAT CTACCCGGCC
GCCGGCATGG CCACAAGTTA CGAGGAGGCC CTCAAGGTGG CGAGCCGCAT CGGCTTCCCG
CTGCTGGTGC GCCCGAGCTA TGTTTTGGGC GGTCGCGGCA TGTTCATCTC CTACAACCCG
CAGACGCTGG AGACCTATAT GGCCGAGGCC ATGCGTGTGT CGCCCGACCA TCCGGTGTAT
CTGGACCATT ACCTCGAAGG CGGCTACGAA TGCGACGTGG ACGCGCTGTG CGACGGCGAA
GACGTCTACA TCGGCGGCGT GCTCGAGCAC ATCGAGGAGG CCGGCATCCA CTCCGGCGAC
TCGGCCACCT GCATCCCGCC GTTCAGCTTC TCGGATCGCA TCGTCAACCA GCTGCGCTCC
ATCACGCGTC AGCTGGCGTT GCGTCTGGGG GTCAAGGGCC TGATCAACGT GCAGTACGCC
ATCAAGAACG ACACCATCTA CGTCATCGAG GCCAATCCGC GCGCCAGCCG TACGGTTCCG
TTCATTTCGA AATCAACCGG CGTGCAGCTG GCCAAGTGCG CCTCGCTCAT CATGGCGGGT
GCGAAGATCG CCGACCTGCA TCTGCCGGCC GACGACCGCG AACTGGACTA TTTCTGCATC
AAGGAAGCCG TCATGCCGTG GGGCCGTTTC CCCGGCGCCG ACGTGGTGCT CGGGCCCGAG
ATGAAATCCA CGGGCGAGGT CATGGGCATC GCTACGTCGT ATCCGGAGGC GTACGCAAAA
TCGCAGCTGG CCATCAGCTA CGAGCTGCCT AAGTCTGGCA AGGTGTTCAT CTCGGTGTGC
GACCGCGACA AGCGCCACAT CCTGCCCATC GCGCGCGCCA TCGACCACAT GGGATTCGAG
ATCGTGTCGA CCGAAGGCAC GGCCAAGGCT CTGCGGGGCG GCAACGTGCA CTGCACAACC
GTGGCAAAAA TCTCAGAACC GTCGCCCAAC ATCGGCGATC TGATCGCGAA CAACGAGATC
GTGCTCATGA TCAACACGCC ATACGGCTCC GAGACCCGCT CCGACGGCTA CTACCTGCGC
ACGCAGGCCA TCAAGCACGG CGTCACGTGC GTGACGGCAC TGTCTGCAGC AGGTGCACTC
CTGGCGGCTT TGGAGACCCT GGTCGACAGC AGCGAGAGTC TTGATGTGCG GGCGCTGCAG
GATCTGAACC AGTTCGACAT TCCGGTGCCG AAGCTGGGTT AG
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| Protein sequence | MPKRTDIKRI LVIGSGPIVI GQACEFDYSG TQACKVLQEE GYEVVLVNSN PATIMTDPQL
ADRTYVEPIT PEFVEKIIAK ERPDALLPTI GGQTGLNTAV ELAKSGVLDK YGVEMIGCDL
DAIERGEDRK LFAEAMEEIG LECARSGYAY SVEDAVELSK SIGFPLVLRP SFTLGGAGGG
IAYDEKQLRE IVAQGLELSP ANEVLVEESI IGWKEYEMEV MRDRAGNGII VCSIENFDAM
GVHTGDSITV APAQTLSDVE YQRMRVASLA ILEKVGVETG GSNVQFALNP DNGRLIVIEM
NPRVSRSSAL ASKATGFPIA KAAARLAVGY TLDEIINDIT LATPACFEPS IDYCVVKVPR
FAFEKFKGTD TTLSTRMKAV GEIMAIGRTF EESFGKAMRS LENGRAGLGA DGKDSFDEEH
FDEYVARPTE DRIFYMAEAL RRGWTVEQLH EATGIDEWFL WRMKDIIAVE QALKGHRLEE
IDAKAMRVAK QYGLSDAQIG YLTSSEEKVV RAYRKGLGVI PTFKTVDTCA AEFASKTEYH
YKTYEDPYRA AGSDGWYEAP AEIAHTDKPK AMILGAGPNR IGQGIEFDYC CVHAAYALHD
AGFETIMVNC NPETVSTDYD TSDRLYFEPL TYEDVMDIVD VERPDGVVVT LGGQTPLKLA
RALADSGVPI MGTQPEAIDL AEDRERFSAI LDELKIIYPA AGMATSYEEA LKVASRIGFP
LLVRPSYVLG GRGMFISYNP QTLETYMAEA MRVSPDHPVY LDHYLEGGYE CDVDALCDGE
DVYIGGVLEH IEEAGIHSGD SATCIPPFSF SDRIVNQLRS ITRQLALRLG VKGLINVQYA
IKNDTIYVIE ANPRASRTVP FISKSTGVQL AKCASLIMAG AKIADLHLPA DDRELDYFCI
KEAVMPWGRF PGADVVLGPE MKSTGEVMGI ATSYPEAYAK SQLAISYELP KSGKVFISVC
DRDKRHILPI ARAIDHMGFE IVSTEGTAKA LRGGNVHCTT VAKISEPSPN IGDLIANNEI
VLMINTPYGS ETRSDGYYLR TQAIKHGVTC VTALSAAGAL LAALETLVDS SESLDVRALQ
DLNQFDIPVP KLG
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