Gene Shel_13070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13070 
Symbol 
ID8395198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1497792 
End bp1498868 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID644986063 
Producthypothetical protein 
Protein accessionYP_003143683 
Protein GI257064011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.625021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.108845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG AGGAATACGA TTCTCGAAAC TTTTCGTCCG CCGAGGACGG TCGTAAGAAG 
CATACGGTTT TCACGGATGC GGACCAAACT CCCATTGCAG CCACCGAGCC CGTCCGCCCG
CCGGAGCCCG CTCCTCCCGC ACCTGCAAGC CCGTATGAAA CCTACAAGCC GGCCAAGGCC
CAGGAGCCTT ACTCGTCTCA GGTGTATTAC CAGCCCACGG AGGACTTCGA CCAGCATGAC
GGCGGGGCTC TTCTGAATGC GGATGACTTC GTGGCCCCGT CCGCCTCTGC GGCCTTGGTG
TGCGGCGTGC TGGCCCTTGT GACGAGCAGC ACCGTCATAC CCAGCGTGAT GCTGGGCATC
GCAGCAATCG CACTGGCCAG GCGCCACGTG AACAACTACG GCCGCGACGG CAAGGCCACC
GCAGGCAAGG TCTGCGGCAT CGTGAGCCTG ATCATTTCGG CGCTCATGCT CTTAGGCGTG
ACGGCTGCGA TCATCGGGTC GTCCCTCGAC GATTACAGCG AGGTGGAAGA GGTTGCCTGG
TCGGACAGCG TCGATTTCTC AGACGATGCG GCCGACGAGG CCTTCGCGGC CATGTATGAC
CCGACCTGCG AGTACTTCAC TCACCCCGAC GAGGACTTCG AGGCGCATTT CAAGGAAGCC
CTGAACAGTA GGTACCAGGA CCAGCACGGC TACACCCTGA CGGAAATGGG CGTTGATGTG
GACGAGGTGT ACGAGTTTCT GATCAGCGGC ACCACCGTGG AGTTGGATTC CAGCTGCTTC
TACGGATACA CAGACGGAAC AGCAACGGCA TATCCGAGAA TACACTGCTA CAACCTGTAC
CTTCTTGATA CCTTCACCTC TGCGTTCATG AACGAAGTAG GCTACGATGC ATCTGCCCAG
ACCTATGGAG AGGCATTCAC GAAGGGGTTC GAGGAGTTCA AAAAGGTCGA CAAGACGGTG
ACCACCGACG GCTACACCGC CTATGTGTCT TACCAGAAGA ACGGCGACAC CTGGGAGTTC
GCCGATCCTG ATGCCCTTAA AGACGAAGCG TCCATGGCCT ACGACATCTA CTACTAG
 
Protein sequence
MSNEEYDSRN FSSAEDGRKK HTVFTDADQT PIAATEPVRP PEPAPPAPAS PYETYKPAKA 
QEPYSSQVYY QPTEDFDQHD GGALLNADDF VAPSASAALV CGVLALVTSS TVIPSVMLGI
AAIALARRHV NNYGRDGKAT AGKVCGIVSL IISALMLLGV TAAIIGSSLD DYSEVEEVAW
SDSVDFSDDA ADEAFAAMYD PTCEYFTHPD EDFEAHFKEA LNSRYQDQHG YTLTEMGVDV
DEVYEFLISG TTVELDSSCF YGYTDGTATA YPRIHCYNLY LLDTFTSAFM NEVGYDASAQ
TYGEAFTKGF EEFKKVDKTV TTDGYTAYVS YQKNGDTWEF ADPDALKDEA SMAYDIYY