Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_13050 |
Symbol | |
ID | 8395196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1496586 |
End bp | 1497233 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986061 |
Product | conserved hypothetical protein TIGR00488 |
Protein accession | YP_003143681 |
Protein GI | 257064009 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR00488] putative HD superfamily hydrolase of NAD metabolism |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.942626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.100655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACG TGAACCGATT CGACGAAATG CGCGAGCGTC TGAAGGCCCG CGTGAAACCG ACCCGTTACA CGCATTCTCT GGGCGTTTCT CAGACTGCAG AGCAGCTTGC CCGCATCTAC GGCGTGGACG AGTCGGAAGC AGCCGTTGCG GGGCTTCTGC ACGACTGGGA CAAGGCCTTG TCCAAAAAGG AAGTCCGCGA GAAGGCGAAG CGCCTGTGCC CCGAGGTTCC CAAAGAGGTG CGGAAAAACG CCGTGGGCGT GCTGCATTCC TTTACGGCGG GAGCCAGCCT GCGCGACGAG TTCCCGGAGC TCTCCGATGC GGTGCTGCAG GCAATCTACC GCCACACCTG CGGAGATCCC GATATGACCG ATCTGGATAT GGTCATCTAC GTGGCCGACA TGATCGAGCC GGGCCGTGAC TTCGAAGGCG TCGAGGACCT GCGTGCAGCC GTGGGCGAAG TGGACCTGGA CGAGCTGTAT TACCTGACGT ACCAGCAGTC CCTCCTGTAC CTGGTACGCT CTGGCAAGAC GGTGTTTCCA GGGTCGCTTG GCACGTGGAA TGCGTTGGTG CTGAGGCGCG AAGCGTCGCT GGCCGAACGC GTCCAAGACG CGACCGCTTC TGCTGAGGTT GCGGAAAACA CCTTGTAA
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Protein sequence | MVDVNRFDEM RERLKARVKP TRYTHSLGVS QTAEQLARIY GVDESEAAVA GLLHDWDKAL SKKEVREKAK RLCPEVPKEV RKNAVGVLHS FTAGASLRDE FPELSDAVLQ AIYRHTCGDP DMTDLDMVIY VADMIEPGRD FEGVEDLRAA VGEVDLDELY YLTYQQSLLY LVRSGKTVFP GSLGTWNALV LRREASLAER VQDATASAEV AENTL
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