Gene Shel_13040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13040 
Symbol 
ID8395195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1495911 
End bp1496576 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID644986060 
Productnicotinate-nucleotide adenylyltransferase 
Protein accessionYP_003143680 
Protein GI257064008 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.668892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0346509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCGA TTTGCGAACG TTTCGACACG CTGGGGTTGG AAGATCCCTC ACGCACCTAC 
CGTCTGGGCA TCATGGGCGG CACCTTCGAC CCCATCCATA TGGGGCACCT GTCCTGCGCC
GAGGAGGTGG CCGATGCCTT CCATCTGGAC GGTGTGGTCT TCATGCCGGC CGGCGACCCG
TGGATGAAAC ACAACCGCCG CGTGTCAGGA GCCGAGGACC GTTTCGCTAT GACCCGTTTG
GCCGTGGCCG ACAATCCGAA GTTCTGCGTG AGCCGCATCG AGATCGACCG GGCGGGGGAG
ACCTACACGG TGGACACGCT GCGCATCATG CGCAGCCATT ATCCCGACAA CGTGGAGCTG
TACTTCATTT CCGGAGCGGA CGCCATCGCC AACATCGCGT CGTGGCGCGG CGCCGCCGAA
CTGGGCGCTC TGGCCCATTT CGTGGGAGTG ACGCGGCCCG GCTACAGCAT GGACCGAGCC
CGCGAGGAGT ACCTCCGCTC GCAGGAGGAC CTGTTCGACC TTCATCAACT TGAAATCACG
GCCCTGGCCA TATCCTCGAC GGATCTGCGC ACCAAGGTGC GCAACGGTCA GTCCATCCGC
TACCTCACGC CGCAGCCGGT GGTGGAATAC ATACAAGAGC ACGGATTGTA TCCGTTGGAA
GATTAG
 
Protein sequence
MAAICERFDT LGLEDPSRTY RLGIMGGTFD PIHMGHLSCA EEVADAFHLD GVVFMPAGDP 
WMKHNRRVSG AEDRFAMTRL AVADNPKFCV SRIEIDRAGE TYTVDTLRIM RSHYPDNVEL
YFISGADAIA NIASWRGAAE LGALAHFVGV TRPGYSMDRA REEYLRSQED LFDLHQLEIT
ALAISSTDLR TKVRNGQSIR YLTPQPVVEY IQEHGLYPLE D