Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12890 |
Symbol | |
ID | 8395180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1479597 |
End bp | 1480136 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644986045 |
Product | rubrerythrin |
Protein accession | YP_003143665 |
Protein GI | 257063993 |
COG category | [C] Energy production and conversion |
COG ID | [COG1592] Rubrerythrin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.199021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA AAGGTTCTAA AACCGAGAAA AACCTGATGT ATGCATTCGC AGGTGAGGCG CAGGCCCACA CTAAGTATCA GTATTACGCA TCCCAGGCCA AGAAGGACGG ATATGTCCAG ATCCAGAACA TCTTCCTGGA AACGGCCAAG AACGAGAAAG AGCACGCCAA GCTGTGGTTC AAAGCACTTC ACGGGGGCGT CGTCCCCAGC ACCCTTGAGA ATCTGGAGGA CGCCGCCAAC GGTGAACATG AGGAATGGAC CGACATGTAC GCCGAGTTCG CAGCCACTGC CCGCGAAGAA GGGTTCGAGG ATCTGGCCGA GCTGTTCGAC GGCGTTGCCG GTGTTGAGAA GGAACACGAG GAGCGTTACC GCAAGCTGAT CGAGCGCATC AACAACGGTG AAGTGTTCAA GCGTGGCGAA GTGTACGCGT GGAAGTGCAA CAACTGCGGG CACATCCACA TCGGCACCGA GCCGCCGGAA GTGTGCCCCG TATGCAACCA TCCCCAGGCG CACTTCGAGA TTCGTTCCGA GAATTATTAA
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Protein sequence | MDLKGSKTEK NLMYAFAGEA QAHTKYQYYA SQAKKDGYVQ IQNIFLETAK NEKEHAKLWF KALHGGVVPS TLENLEDAAN GEHEEWTDMY AEFAATAREE GFEDLAELFD GVAGVEKEHE ERYRKLIERI NNGEVFKRGE VYAWKCNNCG HIHIGTEPPE VCPVCNHPQA HFEIRSENY
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