Gene Shel_12660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12660 
Symbol 
ID8395157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1452790 
End bp1453446 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID644986022 
Productpredicted glutamine amidotransferase 
Protein accessionYP_003143642 
Protein GI257063970 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCAA TCGTGACCCA AAGGGAAAGC ATCGGGGCGC ATGGCGAGCC TGCCGACAGT 
CTGGAGCGCA AATACGTAGA CTTCTTACAT GACGCGGGGT ACGAGGTGTA TCCGATATCG
TCGTTTTCGA CCGATGTGGC GGCGTTCGTC GACGTTGTGA AGCCGGACCT TATCGTGCTG
ACGGGCGGCG GCATCGTCCA GAAGGGCGTC TACCGCTACA ACGTGTCCGG CTGGTACCAG
GACGAACGCG ACCGGATGGA AGACGCCCTG CTCGAAATCG CGTTCAAGCG AGGGATTCCC
GTGCTGGGCA TCTGCCGCGG CATGCACAAG CTGAACGCAT ATTTCGGGGG CAGCATCAGC
TCGTCCGACG GATTGAAGAA GAGCCGCAAG GCGGGCAAGA AGCATCCCGT GGAAATCGCC
GACGGCATCC GTTTCAAGGT GAACCACTTC CACAAGGACT CGATTCTGCC TGAGGATCTG
GGGCAGGGGG TTCAGGCCAT GGCCGTCGAC CCCGCCAACG GCACCATCGA GGCGTTCTGC
CACGAGGAGC AGAAGGTTTT CGGCGTGCAG TGGCACCCCG AGCGCATGGT GGAAGGCAAA
CCCGCCCGTG AATGGGTGCT GGAGCAGCTG GCTCATTTCG GGAAGGTTGC GAACTAG
 
Protein sequence
MRAIVTQRES IGAHGEPADS LERKYVDFLH DAGYEVYPIS SFSTDVAAFV DVVKPDLIVL 
TGGGIVQKGV YRYNVSGWYQ DERDRMEDAL LEIAFKRGIP VLGICRGMHK LNAYFGGSIS
SSDGLKKSRK AGKKHPVEIA DGIRFKVNHF HKDSILPEDL GQGVQAMAVD PANGTIEAFC
HEEQKVFGVQ WHPERMVEGK PAREWVLEQL AHFGKVAN