Gene Shel_12610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12610 
Symbol 
ID8395152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1448438 
End bp1449139 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content50% 
IMG OID644986017 
Producthypothetical protein 
Protein accessionYP_003143637 
Protein GI257063965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTGCG TGGGTAAGCG GGATTTGAGG AGAAAGCCAG GCAACCGTCC TCCGAAGGAC 
AGGATCTATA TCCTTACAGA AGGAGAAGCC ACAGAGATTG AATACCTTAA GGGAATATGC
GCCAGGTTGG GTCTCCCTAA GGAACTGGTC ATAATTAAAA AGGCCTGTAA CACCGACCCC
AAAGGCATCG TTGATGAGCT TGTGTCAGCA AAGAAGCAAA ATGCACGATT GGCTAAACGA
GGCAACGATG CCTTGATTGA CCAGTGGTGG GCTGTTTTTG ATACCGAAGG CCGTCCGCAT
GATTTGTCTG CTGTTGTGCA GAAGGCCAAG GACAACAGGG TTTACCTTGC AATAAGCGAT
CCCAGTTTCG AATTCTGGTT GCGGTTGCAT TTCGGATACA CTACTGCGTC GTACGATTCT
GTTGGCAAGC TTATAAAGGA GTTGAGGGAT AGCGGTTATC TGCCCAAATA TAGCGAAGAC
AACAAGCATC CCGACATGGA TATCCTCTAT CCGCTCTTGC CTCAGGCGAT GAAGAATGCA
CGGCTGCTAC GCGCCAAGCA TACTCAGCTG GGCAATGACC AGCCTCGAAC AGACTGCGAT
TTGCTGATTG ACGCAATCGC GCAACAGAGC AGGGTCTCCC AACTGCAGTT TGATCCAGTT
GTGCTCGTTC CCGAGCAGCT TTCGATGCAC ATTTGCTATT AA
 
Protein sequence
MICVGKRDLR RKPGNRPPKD RIYILTEGEA TEIEYLKGIC ARLGLPKELV IIKKACNTDP 
KGIVDELVSA KKQNARLAKR GNDALIDQWW AVFDTEGRPH DLSAVVQKAK DNRVYLAISD
PSFEFWLRLH FGYTTASYDS VGKLIKELRD SGYLPKYSED NKHPDMDILY PLLPQAMKNA
RLLRAKHTQL GNDQPRTDCD LLIDAIAQQS RVSQLQFDPV VLVPEQLSMH ICY