Gene Shel_12420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12420 
Symbol 
ID8395133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand+ 
Start bp1428501 
End bp1429145 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content55% 
IMG OID644985999 
Productfructose-2,6-bisphosphatase 
Protein accessionYP_003143619 
Protein GI257063947 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.976042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTGT ATGTAATTAG GCACGGCGAA ACCGAAGGCA ACGCCGCAGG TATCTTTCAG 
GGCCGTGTGG ACGGTCAATT GCTTGAGAGC GGCTATAAGC TTGCAAGGGT CACGGGTGAG 
GCGTTGCAGA GTGTGAAATT CGACGCCGTG TTCTCGAGCC CTCTTTCGCG GGCACGCAAC 
ACGGCGCAAG AAGTGCTGAT AGGAAGCGGA AATACGGATG TCCCGATTAC GTTCGACGAC 
CGCTTGCTAG AGATTGACAT GGGCGTTTAC GAAGGCAAGA AGTTCCGTCC TGGGGAGCGG 
GAAGCCGATC CCGAAATGTG TCGACTGTTC TTCGAGGATG CATTTGCGTT TCCCGGGTTT 
CCGAAGGGCG AGGACGCCAG GGGTGTTTGC GCACGCACTC AAGAATTCCT GACCGACCTT 
GCGAAGCATG ACTATGATAC GGTGCTGGTT TCGACTCATG GATTTGCTTT GAGGGCCATG 
CTGAACAGCC TCTACGATAA TCCTGACGAC TTCTGGCAAG GTCACGTTCC TTACAACTGC 
TCGGTGAGCA TCCTCGAGGG TGACGGCGAC GGGCTCAAGC TGGTCGAAGG AGACGTCGTC 
TACTACGACA AGAGCCTTTG CGTGGATAGA TACGCTTCGT ATTGA
 
Protein sequence
MRVYVIRHGE TEGNAAGIFQ GRVDGQLLES GYKLARVTGE ALQSVKFDAV FSSPLSRARN 
TAQEVLIGSG NTDVPITFDD RLLEIDMGVY EGKKFRPGER EADPEMCRLF FEDAFAFPGF 
PKGEDARGVC ARTQEFLTDL AKHDYDTVLV STHGFALRAM LNSLYDNPDD FWQGHVPYNC 
SVSILEGDGD GLKLVEGDVV YYDKSLCVDR YASY