| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12390 |
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| Symbol | |
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| ID | 8395130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1424737 |
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| End bp | 1425702 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644985996 |
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| Product | 4-diphosphocytidyl-2-methyl-D-erythritol synthase |
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| Protein accession | YP_003143616 |
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| Protein GI | 257063944 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATCG CCACTAATAT CAAACTCCGC CGTCTTGAGC TTGGTCTTAC GCAGGACCAG
CTTGCGCGCG CAATAGGTTA CAGATCGCGT TCGGCGGTTG CGAAGATCGA ATCTGACGCG
ACCGACTTGC CGGTATCGAA GCTTCTTTTG TTGGCTCAGG CACTTGATAC AACGCCCGAA
CGCCTATTGG AGGGTGCGGG CGAGTTTTCG TATTCCGATG CTGGTAGCGA GAGCCGTGCG
ACTCGAGTGG ACCATGGTCA GCCGCGAGTC GCGGCGGTAA TCCTGGCTGG GGGACGTTCT
TCAAGAAACA TGCGAAACGT TCCGAACCAG TTCATCAGCA TTCTTGGTAG GCCCGTAGTG
GACTATTGCA TGGAGGCCTA CCAATCTCAT CCAATGGTGG ATGAGATTTA CGTTGTATGC
CTTGAGGGCT TTGAGGACAT TATGAATGCT TACGCCAGAA GGCGTAAAGT TACTAAGCTC
GTCAAGATTC TGCCCGCAGG TAAGACAGGG GTGCTCTCTG CACGCAAGGG TTATCAGGCG
CTTTGCGACA AAGGGTACAG GCCTAGCGAC ATAGTTGTGT TCCAGGAATC AACGCGCCCA
TTCGTAACCG AAGAAATGAT TACGGGACTC ATACAGGCAA CGAGAGAAAA AGGCAGCGTC
ATAACGGGTG AAGTCAGATC GGATAACGTT CAATTCTTTC AGGATGACAA TGGCGGGCTG
AAGTATCTCG ATCGCAATAA GATCATAGAC CTTCAGTCTC CGGATGCGCA CAAGATTTCA
GTAGTTAGAG ATGTATTCAA GCGTGCAGAC AATGAAGGTC ATGAGCTGGT TGAGAGCAAC
ATTGGCATGC TTATGTACAA TCTCGGATTC ACTCTTAATT TCAGAGAAGG CGCTCGCAAC
AACATAAAAA TCCTCAGGGA AGAGGACGTT GCTGTTGCTA CGGCTCTATT AAAGCAGCAA
GGTTAA
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| Protein sequence | MTIATNIKLR RLELGLTQDQ LARAIGYRSR SAVAKIESDA TDLPVSKLLL LAQALDTTPE
RLLEGAGEFS YSDAGSESRA TRVDHGQPRV AAVILAGGRS SRNMRNVPNQ FISILGRPVV
DYCMEAYQSH PMVDEIYVVC LEGFEDIMNA YARRRKVTKL VKILPAGKTG VLSARKGYQA
LCDKGYRPSD IVVFQESTRP FVTEEMITGL IQATREKGSV ITGEVRSDNV QFFQDDNGGL
KYLDRNKIID LQSPDAHKIS VVRDVFKRAD NEGHELVESN IGMLMYNLGF TLNFREGARN
NIKILREEDV AVATALLKQQ G
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