Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12360 |
Symbol | |
ID | 8395127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1421925 |
End bp | 1422650 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644985993 |
Product | LICD family protein |
Protein accession | YP_003143613 |
Protein GI | 257063941 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATTTG AATTGAAGCG CTGTTCGTAC TTGAGAATAA AAAAGATTGT TAATCGTTAT TCTGTCCTCA AGAAAATGAA TACTATACGG CGAAGGATTC GTGGTTCAAA AGGGCGCAAG GCCGTAGAGC AGAATGGATT GAAGACGGCC TCCGCAGTAG TATCGATTAT GGAAAATTCA GGATTCGAAC CCGTTCTTTC GTTCGGAACT TTATTAGGTG CTGTTCGCGA ACATGATTTA ATTCATGGGG ACAACGACAT TGATCTTGGT ATTATCGTTG ATTATAACGA CGACGAAACG TGGCGCAAGG TTCGTAGCGT ACTGGAAGAA GGCGGTTATC AACTGCTCAG GCAGTATTCG TATTCCGGTA GTATCACCGA GCAAGCGTAT GGCGCGGATG GCTTCTCGTT TGATGTTTGG GGGTTTTTGC GCGAACCCGA TGGTAGGCAT TTGCGGTCTT TCTACCATTG TCGTATAGAC GAAGGTGTGT ACCATTCTGA TAGAGACAGG TCAATCAAGT ACATTGACAT GCCAGTTTTT GAAAATCGGA GGTACACAAA GGTTGGTGAG TACCAACTCC CTGTGCCGAT TAATGCAGAA CAAATGGTTG CAGCTGTGTA TGGTGATGAC TGGCAAACGC CCAATCCGAA TTTCGTAGCG GGTACGGGGT TTACGCTTGT AGAGGGCGTT GTCGAAACGT ACCAAGAATT TATGTCTGGT CATTAA
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Protein sequence | MLFELKRCSY LRIKKIVNRY SVLKKMNTIR RRIRGSKGRK AVEQNGLKTA SAVVSIMENS GFEPVLSFGT LLGAVREHDL IHGDNDIDLG IIVDYNDDET WRKVRSVLEE GGYQLLRQYS YSGSITEQAY GADGFSFDVW GFLREPDGRH LRSFYHCRID EGVYHSDRDR SIKYIDMPVF ENRRYTKVGE YQLPVPINAE QMVAAVYGDD WQTPNPNFVA GTGFTLVEGV VETYQEFMSG H
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