Gene Shel_12360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12360 
Symbol 
ID8395127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1421925 
End bp1422650 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID644985993 
ProductLICD family protein 
Protein accessionYP_003143613 
Protein GI257063941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTTG AATTGAAGCG CTGTTCGTAC TTGAGAATAA AAAAGATTGT TAATCGTTAT 
TCTGTCCTCA AGAAAATGAA TACTATACGG CGAAGGATTC GTGGTTCAAA AGGGCGCAAG
GCCGTAGAGC AGAATGGATT GAAGACGGCC TCCGCAGTAG TATCGATTAT GGAAAATTCA
GGATTCGAAC CCGTTCTTTC GTTCGGAACT TTATTAGGTG CTGTTCGCGA ACATGATTTA
ATTCATGGGG ACAACGACAT TGATCTTGGT ATTATCGTTG ATTATAACGA CGACGAAACG
TGGCGCAAGG TTCGTAGCGT ACTGGAAGAA GGCGGTTATC AACTGCTCAG GCAGTATTCG
TATTCCGGTA GTATCACCGA GCAAGCGTAT GGCGCGGATG GCTTCTCGTT TGATGTTTGG
GGGTTTTTGC GCGAACCCGA TGGTAGGCAT TTGCGGTCTT TCTACCATTG TCGTATAGAC
GAAGGTGTGT ACCATTCTGA TAGAGACAGG TCAATCAAGT ACATTGACAT GCCAGTTTTT
GAAAATCGGA GGTACACAAA GGTTGGTGAG TACCAACTCC CTGTGCCGAT TAATGCAGAA
CAAATGGTTG CAGCTGTGTA TGGTGATGAC TGGCAAACGC CCAATCCGAA TTTCGTAGCG
GGTACGGGGT TTACGCTTGT AGAGGGCGTT GTCGAAACGT ACCAAGAATT TATGTCTGGT
CATTAA
 
Protein sequence
MLFELKRCSY LRIKKIVNRY SVLKKMNTIR RRIRGSKGRK AVEQNGLKTA SAVVSIMENS 
GFEPVLSFGT LLGAVREHDL IHGDNDIDLG IIVDYNDDET WRKVRSVLEE GGYQLLRQYS
YSGSITEQAY GADGFSFDVW GFLREPDGRH LRSFYHCRID EGVYHSDRDR SIKYIDMPVF
ENRRYTKVGE YQLPVPINAE QMVAAVYGDD WQTPNPNFVA GTGFTLVEGV VETYQEFMSG
H