Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12320 |
Symbol | |
ID | 8395123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1417648 |
End bp | 1418679 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644985989 |
Product | glycosyl transferase |
Protein accession | YP_003143609 |
Protein GI | 257063937 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTAAGT CAGCTCTACA CTTCGAAACA GCACCGAAGC CCACCATAAG CGTCGTCATC CCCTTCTACA ACCTTGAGGC GGAAGCGCCT AGATGCTTGG ATTCGGTTCT TTCGCAAACG TACGAAGACT ATGAAATCAT CTGTGTAGAT GACGGTTCTG TGGACGGCAC CCCGGCCGTC CTTGATGCAT ATGCATCGGA TCACGCTAGG ATTCGTGTGA TCCATAAAGA AAACGGCGGA TTATCCGATG CAAGGAATTG CGGTGTGGCT GCATGCAGGG GAACATATGT CAGCTTTATA GACGGTGATG ATGTCGTTTC ACCCTGCTAT CTCTCTTCTA TGGCTCAAGC CATGGAAGAT GCGCCAGATA GGTTGATCAT CGGGACTTGC TTAGACGTGA ATGAGGATTG TGTTGCGGCT GCGCTTGAGA AGATGCCTGG CTCTACAGCT GCTAAAGATT TGTCGCACGA AGATGCATGC AAGGCAATAT TAGCAAAGCG ATTACCGACG TGTGCGCCGG CTAAGCTGTT CAACCTTCGC TATTACAAAG AGCACCCGTT TCCTCTTGGC GTTCGTTATG AAGAGGTTCG AACGATAGGG AAACTGATGG CCTGCGCCAA AGAAGTGCGT GTGATTGAAT CTCCTATCTA TGGATACGTC ATCCGTGAAG GTTCGATAGT TCATGCGCAA AATGCCACCA TTGAGCAAGG CACTGAGTAT GTCGAAGCGA TACAAACTGC ATTAGATGAC TTTAGAAGGC TTGGCTACAA TTTTGAAAAT GACCTCGCAT TTTTCGATTC ATTGATGCAT GTAAGAGTTC ATGATTTCAC AAAACGCATG GCGAACGAAT CGGAAGCACG AACGATAGAC GAGATGGCAA GGGCCTCTGT CAAGGCGAGC TATCGGAAGG CGGTCCGTTG TGAACGTGCC AGTAGGGCGC AGAAGGCACG TTTGGCGTTG TTTAGGTATG CACCCATTCT ATATGACGTA GCTATGCCAG TTTATAACCG TCTATTCAAA GGCGTGCTTT AG
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Protein sequence | MVKSALHFET APKPTISVVI PFYNLEAEAP RCLDSVLSQT YEDYEIICVD DGSVDGTPAV LDAYASDHAR IRVIHKENGG LSDARNCGVA ACRGTYVSFI DGDDVVSPCY LSSMAQAMED APDRLIIGTC LDVNEDCVAA ALEKMPGSTA AKDLSHEDAC KAILAKRLPT CAPAKLFNLR YYKEHPFPLG VRYEEVRTIG KLMACAKEVR VIESPIYGYV IREGSIVHAQ NATIEQGTEY VEAIQTALDD FRRLGYNFEN DLAFFDSLMH VRVHDFTKRM ANESEARTID EMARASVKAS YRKAVRCERA SRAQKARLAL FRYAPILYDV AMPVYNRLFK GVL
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