Gene Shel_11150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11150 
Symbol 
ID8395006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1271960 
End bp1272904 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content63% 
IMG OID644985873 
Producthypothetical protein 
Protein accessionYP_003143499 
Protein GI257063827 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.280093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACC TTAAAATCGC GCTGCTGATC GACGGCGACA ACGTGTCCGC CAACTACATC 
GGCAGCATCT TAGACGAGCT TACCGAAACC GGCACCACCA CCATCAAGCG CATCTACGGC
GACTGGACCA GGCCCGAGAT GCGTTCCTGG CGCGACCAGC TGCTGGGTCG CTCGGTGCAG
CCCGTGCAAC AGTTCTCCAA CGTGTCCGGC AAAAACGCCA CCGACTCGGC GCTGATCATC
GACGCCATGG ACATCCTGTA CGGCCGCGAC GTGGACGCCT TCTGCATCGT GTCCAGCGAC
TCCGACTTCA CACGCCTGGC CAGCCGGCTG ACCGAATCCG GCAAGGTGGT CATCGGCATG
GGGGAGGAGA AGACCCCGGA CGCCTTCCGC AACGCCTGCA CCAAGTTCGT CAACCTTGAG
AACCTGAGCA GCGCCTCCAA CGGCGACGAC GAGTCGTCGG GGCACGGCAC GGCGTCGGCC
ACGCTCAAGG GCGTGGAGCA CGTGATCGCC AAGGTGATCC GCGACAACGA GAACCGCGGC
CGCGTGACGC AGCTGAGCGA GGTGGGCAAC CGCCTGTCCA AGAAGTACCC CGACTTCGAC
GTGCGGTCCT TCGGGTACTC GTACCTGTCC CGCATGATCG AGGACATGCC GCGCTTCGTG
CTGACCCGCA CCGACACCAA GGTGACGGTG TCCATTTCGC AGGACCAGGC CACGCAGGTC
ACCGAGCAGG TCAAAGCGTT CATCCTGACC ACGGTGGGCG AGCACAAGAA CAAGCGCATG
GGCGTCAGCG AGCTGTCCAA CAAGGTGTAC GAGGCGTTCC CTGGCTTCAA GCTGAAGGAT
TCGGGCTACT CGCAGATTTC CAAGCTTGTG GCCAGCATCG ACGGCATGTC CGTCGAGTCC
GGCCGCAACA ACAAGAAGTA CGCCGTGGTC CTGACCGACG AATAA
 
Protein sequence
MEDLKIALLI DGDNVSANYI GSILDELTET GTTTIKRIYG DWTRPEMRSW RDQLLGRSVQ 
PVQQFSNVSG KNATDSALII DAMDILYGRD VDAFCIVSSD SDFTRLASRL TESGKVVIGM
GEEKTPDAFR NACTKFVNLE NLSSASNGDD ESSGHGTASA TLKGVEHVIA KVIRDNENRG
RVTQLSEVGN RLSKKYPDFD VRSFGYSYLS RMIEDMPRFV LTRTDTKVTV SISQDQATQV
TEQVKAFILT TVGEHKNKRM GVSELSNKVY EAFPGFKLKD SGYSQISKLV ASIDGMSVES
GRNNKKYAVV LTDE