| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11090 |
|---|
| Symbol | |
|---|
| ID | 8395000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1264672 |
|---|
| End bp | 1265691 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644985867 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_003143493 |
|---|
| Protein GI | 257063821 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000340042 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0123253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATAC CTGACAACTA CCTGTCGCCT TCGACCTGCG GCGTTCTGAC CGTCGCCATG
GTGCCCGTCT GGGCCCACTG CGTCAAAAAG GTGAAAGAGG AACTCGATCG CGAGAAGGTG
GCGTTCATCG GCGTTGCAGC CGCGTTCTCC TTCCTGCTCA TGATGTTCAA CGTGCCGCTG
CCGGGCGGCA CCACGGGACA TGCCGTGGGC GCGGTGCTGA TTGCCATTTT GCTAGGGCCC
GAAGCGGCGT GTTTGGCCGT CACCGTGGCG CTTCTCATCC AGGCGCTGCT CTTCGGCGAC
GGCGGCATCC TGGCCTTCGG CGCGAACTGC TTCAACATGG CCTTCATCAT CCCGTTTTCG
GGGTACTACA TATATAGGTT CATCCGCGAC CACGCGCCTG CCGCCTGGGG CGATAAGGTG
GGTGCTTTTG TCGGCGCCTA CGTCGGCATG AACCTGGGCG CGTTTATGGC CGCCGTCGAA
TTCGGCATCC AGCCCCTGCT GTTTACGGAC GCGGCGGGCA ACGCCCTGTA CTGTCCCTAT
CCACTGGCCG TCTCCATTCC CGCAATGCTG ATCCCACACC TGCTGCTTGC GGGCATCGTG
GACGCCCTGG CCACCGTGCT CATTTACACC TTCGTGAAGA ACGCCGCGCC TGAATACGTG
TACAAGCCGG CCGATTCCCA GGTGGACACC TCCAAAAAGG GCTCGTTGGT CACCGTCTAC
GCGTTGGTGG CCGTGCTTGT CGTAGCCACG CCGCTGGGCC TGCTTGCCGG GTCCGGCGAC
GGTTGGCTCT CCCGGTTCGG CGACGCCTGG GGAGAATGGG GCACCGAAGA CGTGGCCGCT
ATGGTAGGCT ATACGCCCGG CGGCATGGCC GACGGCTTCG AATGGAGCGC CATCATGCCT
GATTACTCGC TGGCGGGGCT GCCTGACGTG GCGGCGTACA TCCTGTCTGC GGTCATCGGC
GTGCTGCTGC TCATCGTAGG CTTCAAGGTC GTCTCGTCGT TCGTCTCGAA CAAGGAGTAA
|
|---|
| Protein sequence | MHIPDNYLSP STCGVLTVAM VPVWAHCVKK VKEELDREKV AFIGVAAAFS FLLMMFNVPL
PGGTTGHAVG AVLIAILLGP EAACLAVTVA LLIQALLFGD GGILAFGANC FNMAFIIPFS
GYYIYRFIRD HAPAAWGDKV GAFVGAYVGM NLGAFMAAVE FGIQPLLFTD AAGNALYCPY
PLAVSIPAML IPHLLLAGIV DALATVLIYT FVKNAAPEYV YKPADSQVDT SKKGSLVTVY
ALVAVLVVAT PLGLLAGSGD GWLSRFGDAW GEWGTEDVAA MVGYTPGGMA DGFEWSAIMP
DYSLAGLPDV AAYILSAVIG VLLLIVGFKV VSSFVSNKE
|
|---|
| |