| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10900 |
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| Symbol | |
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| ID | 8394981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1245678 |
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| End bp | 1246640 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985848 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003143474 |
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| Protein GI | 257063802 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.631494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000285325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGGACGTTC AGACCGAATA CCTCTACGTA GACGAAACCG GCGACGGCAT GCGCCTGGAC
GCGTTCCTCG CCAAGGAGGG CGCCTATACT ACCCGTTCCG CCGCAGCTAA ACGCGTGGCG
GCGGGGGAGG TGTCCATCAA CGGCGTGGCG GCCCGCAAAA GCGCCACGGT CAAAGCCGGC
GACGTGGTGG AGTACCAGGT GTTCATCGAT CCGCGGGTGT TCGACTTGGA ATCCGCCGAC
ATTCCGCTGG ACGTCCGTTA CGAAGACGAC CAGGTGCTGG TCATCTCCAA GCAGGCCGGT
CTGGTAACCC ATCCTGCCGA CGGGCATCCG CAACAGGACA CGCTGGTCAA CGCGCTGATC
CACCACTGCG GTCGCGAGAA CCTGTGCAAC GTGCAGGGCG AGCAGGACCG CTTGGGCATC
GTGCACCGTC TGGACCGGGA TACCAGCGGA CTCATGCTGG CGGCCAAGAC CAACGAAGCC
GGCCAGAAGC TTATGGAGGA CATCGCCGAC CGCGACGTGG ACCGCCATTA CCTCGCGCTG
GTGCATGGCT GGATTCCCCT CGAAACGGGT TTGGTGGACG CGCCCATCGG CCGCAGCGAC
CGCGACCGGC TGCGCATGTG CGTCTCCGAC CGGGACAACG CCCGCGACGC CATGACCTCG
TTTTCCGTGG TCAAGCGGTT CGAAGCCGGA AGAAACGACG ACGGCTACAC TCTTATCGAC
TGCAAGCTTT TCACGGGGCG CACGCATCAG ATCCGCGTGC ATATGGAATA CATCAAGCAC
CCCTGCGTGG GCGACCCTGT GTACGGCTGG GCCAAGCACG ACAACCTGGG GCTCGACCGC
CAGTTCCTGC ATTCCTACAA GCTGGCCTTC ACCCATCCGA CGACAGGGGA GCGTCTGCAG
TTCGAAGACA CCCTGCCCGC CGATCTGCAG CGCGTCATCG ACGAGCTCGA GGCCCGCGGA
TAG
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| Protein sequence | MDVQTEYLYV DETGDGMRLD AFLAKEGAYT TRSAAAKRVA AGEVSINGVA ARKSATVKAG
DVVEYQVFID PRVFDLESAD IPLDVRYEDD QVLVISKQAG LVTHPADGHP QQDTLVNALI
HHCGRENLCN VQGEQDRLGI VHRLDRDTSG LMLAAKTNEA GQKLMEDIAD RDVDRHYLAL
VHGWIPLETG LVDAPIGRSD RDRLRMCVSD RDNARDAMTS FSVVKRFEAG RNDDGYTLID
CKLFTGRTHQ IRVHMEYIKH PCVGDPVYGW AKHDNLGLDR QFLHSYKLAF THPTTGERLQ
FEDTLPADLQ RVIDELEARG
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