Gene Shel_10860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10860 
Symbol 
ID8394977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1240553 
End bp1241038 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content58% 
IMG OID644985844 
Producthypothetical protein 
Protein accessionYP_003143470 
Protein GI257063798 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.405906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000176552 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGCGACG TCAATCCTGA ATATGTCGAA CGCCTGATGG AGTTCATAAA TGCGAGTCCG 
TTCGCCATGG AGCACAACTT CAAAGTGGAG GAGATGCGTC CTGGCTACGC CCGAGTGGTG
GCGGAGCCTG ACGGGCGGTT CCTCAATCCC ACGGGCGGCC TGCACGGCGG CTATTACTCC
TCGCTGGTCG ATACCGCCAC GGGTTACGCC ACGTTCCTGC TGCATACCGA GGATGTGGGC
ACCATCACGC TGGATGTGAA CGTGACCTAC GCGAAGCCTT TCAAAACAGG CAAGATCATC
GCGGAGGGCA ACGTCATCAA AGTAGGCACC AAGGTAGACA TGTCGGAATG CGTCGTTCGT
GACGAGGAGG GGAGGCTTCT GGCCAGCGGA TCTTCGAACC TGATGATCAT TCCCGGTGTG
CAGATCATGG AGGACTGCGT CGTCGAATCG GGTCGTCCGC CCATGCCCCC GAAGTTCCTA
GATTAA
 
Protein sequence
MRDVNPEYVE RLMEFINASP FAMEHNFKVE EMRPGYARVV AEPDGRFLNP TGGLHGGYYS 
SLVDTATGYA TFLLHTEDVG TITLDVNVTY AKPFKTGKII AEGNVIKVGT KVDMSECVVR
DEEGRLLASG SSNLMIIPGV QIMEDCVVES GRPPMPPKFL D