| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10780 |
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| Symbol | |
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| ID | 8394969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1232994 |
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| End bp | 1233971 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985836 |
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| Product | tRNA isopentenyltransferase MiaA |
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| Protein accession | YP_003143462 |
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| Protein GI | 257063790 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0261431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000200273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGGCGCTTG ATCTCACATA CCCCGTCATC GTCGTCGTAG GTCCTACGGC CTCCGGCAAA
TCCGGCGTGG CCGCAGAGTT CGCCCGGCGG GTGCATGGCG AAGTGGTTTC GGCCGATTCG
ATGCAGGTCT ACCGCGGCAT GGATATCGGT ACGGGCAAGA TAACCCCTGA TGAGCAGCTT
GTAACCCACC ACGGGCTCGA CATCTGCAAT CCTGGCGAGG CTTATTCGGC ATCCCGTTTC
CAGGAGTACG CCAGGGCATG CTTCGCAGAC ATCGACGCGC GTGGTTCGCT GTCGGTGCTT
GCGGGCGGGA CCGGGTTCTA CGTGCGCGCG GCCATTGACG ATTACGATTT CGCATCGGGC
GAGCAGGTGG GAAACCCCGT GCGCGACAAG TGGCAGGCCT ATTACGACGA GAACGGCGCC
GATGCGCTGT GGAACAGGCT TCACGAGGTG GATCCGAAAA GCGCGGACAT CATCCATCCC
AACAACGTGA AGCGCGTCAT TCGTGCTTTC GAGATGCTTG AGCTGGACGG TAAAGGCTAT
GCCCAGGTGC ATGCGGGATT GGCAAGCATC GGGCAGTTCG TCCCGGCGGT GTTCTTCGGT
CTGGCCGTGA CGCCCGACCT TCTGGTGCAG CGCATCGAAC GCCGCGTGGA CGCCATGTTC
GACGCGGGAT TGGTCGCCGA GGTGGAGGGC CTGCTCGAGC AGGGGTTCGA AAGCGCCTGC
ACGGCTCGGG ACGCCATAGG CTATAAGGAA GTGGTTGCGG CGCTTCGGGG TGAAATCACC
ATGGACGAGG CCCGCGAACA GATCAAGACC GCCACAAGGC GCTATGCCAA GCGGCAGCGC
AGCTGGTGGC GTAAGGATTC GCGTATCATA TGGCTGGATG CGGACGATCC TAATCCGCAG
AAGCTTGCCG ACGAGATACT TAAAACGCTT TCAGACAAGG GGTATACGGA TGTCGTTTGC
CGATATGGAC GCCAATAG
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| Protein sequence | MALDLTYPVI VVVGPTASGK SGVAAEFARR VHGEVVSADS MQVYRGMDIG TGKITPDEQL
VTHHGLDICN PGEAYSASRF QEYARACFAD IDARGSLSVL AGGTGFYVRA AIDDYDFASG
EQVGNPVRDK WQAYYDENGA DALWNRLHEV DPKSADIIHP NNVKRVIRAF EMLELDGKGY
AQVHAGLASI GQFVPAVFFG LAVTPDLLVQ RIERRVDAMF DAGLVAEVEG LLEQGFESAC
TARDAIGYKE VVAALRGEIT MDEAREQIKT ATRRYAKRQR SWWRKDSRII WLDADDPNPQ
KLADEILKTL SDKGYTDVVC RYGRQ
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