Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10740 |
Symbol | |
ID | 8394965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1228496 |
End bp | 1230037 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985832 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003143458 |
Protein GI | 257063786 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.462426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000186001 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGACTACG TTATCGTTAT CCTCGTGCTC ATCGTCGGCA TCGCCGCCGG TGTGGCTATC GGTTTGATCG TCTCCCGCAA CATGGCAAAC TCTTCCACCC GTCGCGCTGC CGATGAGGCC AAACGCCTGA TCGACGATGC GGAACGACAG GCCGACACGC TGCGCCGCGA GGCAGTCGTC GAAGCCAAGG ATGAAGTTCT GAAAATGAAG CAGGAGGCCC AGGCCGAAAA CAAGGAGCGC ATGCGCGAAG TGCGCGCTGC CGAGAACCGC ATCAACCAGC GTGAGGAATC CCTCGACCGC CGCGTGGAGA GCCTGGATGC CCGTGAGCAT CAGCTGTCCT CTATGCAGGG TCAAGTTGAA CGCCGCGAAC GCGACGTCGC CAAGGCTATG GAAGAGGTCA ACGTCCGCCT GGAGGAGGTT GCCGGCATGT CTCCGCAGGA AGCCAAGGAA GAGCTTCTCG ACTCCCTGCG CGACGAGGTC ACCCATGAAA GCGCCGCCAT CATCCGCGAT GCCGAGCAGC GCACCAAGGC CGAGGCCGAC CGCAATGCCC GCGAGATCCT GAGTCTGGCC ATCCAGCGTG TCGCTGCCGA CCACACGGCT GAAACCACGG TCAAGACCAT CCACATCCCC AGCGATGATC TGAAGGGTCG CATCATCGGT CGCGAAGGCC GCAACATTCG CTCTTTTGAG CAGCTGACGG GCGTGAACCT GCTTATCGAC GACACGCCGG AGTGCGTCAC CATCTCGTGC TTCGACCCGG TTCGTCGCGA GATTGGCCGC ATCACCATGG AGAACCTCAT CGCCGACGGC CGTATCCATC CGGCCCGCAT CGAGGAAATG TTCTCCAAGG CTGAGCGTCT GGTGAACCAA CAGGTGCAGG AGGCCGGCGA GCAGGCCACC TTCGATTGCG GCATCCATGA TCTGCATCCG GAGCTGGTCC GCACCTTGGG CCGTCTGCGC TACCGCACCT CCTACGGCCA AAGCGTCCTC AACCACTCGC TGGAAGTCGC GTACCTGTGC GGCGTCATGG CTTCCGAGCT CGGTCTGGAC CCTGCTCCCG CCAAGCGCGC AGGTTTGCTG CACGACATCG GCAAAGCCAT CGACCATGAG GTCGAAGGCC CCCACGCTCT CATCGGCGGC GATCTTGCCC GTCGTTTTGG GGAACGTCCC GAAATCGTGC ACGCCATCGA GGCGCATCAC AACGACATCG AAACCAACAG CGTCATCGAC GTTCTGGTTC AGGCCGCCGA CGCCGTTTCT GCGGCACGTC CCGGCGCCCG CAAGGAAAGC CTCGAGAGCT ACATCAAGCG TCTCGAGAAG TTCGAGGAGA TTGCAAACGC CCATCCCGGC GTCGAGCGCA CCTATGCCAT GCAGGCCGGT CGTGAGATCC GCGTCATGGT TGCTCCCGAA CAGGTCGACG AGGCCGCTTC CGTGGTGCTT GCGCACGACA TCGCCAAACA GATCGAAGAC GAAATGCAGT ACCCCGGCCA GGTGAAGGTC GTGGTTATCC GTGAAAGCCG CGCCATCGAC TACGCCAAGT AA
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Protein sequence | MDYVIVILVL IVGIAAGVAI GLIVSRNMAN SSTRRAADEA KRLIDDAERQ ADTLRREAVV EAKDEVLKMK QEAQAENKER MREVRAAENR INQREESLDR RVESLDAREH QLSSMQGQVE RRERDVAKAM EEVNVRLEEV AGMSPQEAKE ELLDSLRDEV THESAAIIRD AEQRTKAEAD RNAREILSLA IQRVAADHTA ETTVKTIHIP SDDLKGRIIG REGRNIRSFE QLTGVNLLID DTPECVTISC FDPVRREIGR ITMENLIADG RIHPARIEEM FSKAERLVNQ QVQEAGEQAT FDCGIHDLHP ELVRTLGRLR YRTSYGQSVL NHSLEVAYLC GVMASELGLD PAPAKRAGLL HDIGKAIDHE VEGPHALIGG DLARRFGERP EIVHAIEAHH NDIETNSVID VLVQAADAVS AARPGARKES LESYIKRLEK FEEIANAHPG VERTYAMQAG REIRVMVAPE QVDEAASVVL AHDIAKQIED EMQYPGQVKV VVIRESRAID YAK
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