Gene Shel_10740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10740 
Symbol 
ID8394965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1228496 
End bp1230037 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content62% 
IMG OID644985832 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003143458 
Protein GI257063786 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.462426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000186001 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACTACG TTATCGTTAT CCTCGTGCTC ATCGTCGGCA TCGCCGCCGG TGTGGCTATC 
GGTTTGATCG TCTCCCGCAA CATGGCAAAC TCTTCCACCC GTCGCGCTGC CGATGAGGCC
AAACGCCTGA TCGACGATGC GGAACGACAG GCCGACACGC TGCGCCGCGA GGCAGTCGTC
GAAGCCAAGG ATGAAGTTCT GAAAATGAAG CAGGAGGCCC AGGCCGAAAA CAAGGAGCGC
ATGCGCGAAG TGCGCGCTGC CGAGAACCGC ATCAACCAGC GTGAGGAATC CCTCGACCGC
CGCGTGGAGA GCCTGGATGC CCGTGAGCAT CAGCTGTCCT CTATGCAGGG TCAAGTTGAA
CGCCGCGAAC GCGACGTCGC CAAGGCTATG GAAGAGGTCA ACGTCCGCCT GGAGGAGGTT
GCCGGCATGT CTCCGCAGGA AGCCAAGGAA GAGCTTCTCG ACTCCCTGCG CGACGAGGTC
ACCCATGAAA GCGCCGCCAT CATCCGCGAT GCCGAGCAGC GCACCAAGGC CGAGGCCGAC
CGCAATGCCC GCGAGATCCT GAGTCTGGCC ATCCAGCGTG TCGCTGCCGA CCACACGGCT
GAAACCACGG TCAAGACCAT CCACATCCCC AGCGATGATC TGAAGGGTCG CATCATCGGT
CGCGAAGGCC GCAACATTCG CTCTTTTGAG CAGCTGACGG GCGTGAACCT GCTTATCGAC
GACACGCCGG AGTGCGTCAC CATCTCGTGC TTCGACCCGG TTCGTCGCGA GATTGGCCGC
ATCACCATGG AGAACCTCAT CGCCGACGGC CGTATCCATC CGGCCCGCAT CGAGGAAATG
TTCTCCAAGG CTGAGCGTCT GGTGAACCAA CAGGTGCAGG AGGCCGGCGA GCAGGCCACC
TTCGATTGCG GCATCCATGA TCTGCATCCG GAGCTGGTCC GCACCTTGGG CCGTCTGCGC
TACCGCACCT CCTACGGCCA AAGCGTCCTC AACCACTCGC TGGAAGTCGC GTACCTGTGC
GGCGTCATGG CTTCCGAGCT CGGTCTGGAC CCTGCTCCCG CCAAGCGCGC AGGTTTGCTG
CACGACATCG GCAAAGCCAT CGACCATGAG GTCGAAGGCC CCCACGCTCT CATCGGCGGC
GATCTTGCCC GTCGTTTTGG GGAACGTCCC GAAATCGTGC ACGCCATCGA GGCGCATCAC
AACGACATCG AAACCAACAG CGTCATCGAC GTTCTGGTTC AGGCCGCCGA CGCCGTTTCT
GCGGCACGTC CCGGCGCCCG CAAGGAAAGC CTCGAGAGCT ACATCAAGCG TCTCGAGAAG
TTCGAGGAGA TTGCAAACGC CCATCCCGGC GTCGAGCGCA CCTATGCCAT GCAGGCCGGT
CGTGAGATCC GCGTCATGGT TGCTCCCGAA CAGGTCGACG AGGCCGCTTC CGTGGTGCTT
GCGCACGACA TCGCCAAACA GATCGAAGAC GAAATGCAGT ACCCCGGCCA GGTGAAGGTC
GTGGTTATCC GTGAAAGCCG CGCCATCGAC TACGCCAAGT AA
 
Protein sequence
MDYVIVILVL IVGIAAGVAI GLIVSRNMAN SSTRRAADEA KRLIDDAERQ ADTLRREAVV 
EAKDEVLKMK QEAQAENKER MREVRAAENR INQREESLDR RVESLDAREH QLSSMQGQVE
RRERDVAKAM EEVNVRLEEV AGMSPQEAKE ELLDSLRDEV THESAAIIRD AEQRTKAEAD
RNAREILSLA IQRVAADHTA ETTVKTIHIP SDDLKGRIIG REGRNIRSFE QLTGVNLLID
DTPECVTISC FDPVRREIGR ITMENLIADG RIHPARIEEM FSKAERLVNQ QVQEAGEQAT
FDCGIHDLHP ELVRTLGRLR YRTSYGQSVL NHSLEVAYLC GVMASELGLD PAPAKRAGLL
HDIGKAIDHE VEGPHALIGG DLARRFGERP EIVHAIEAHH NDIETNSVID VLVQAADAVS
AARPGARKES LESYIKRLEK FEEIANAHPG VERTYAMQAG REIRVMVAPE QVDEAASVVL
AHDIAKQIED EMQYPGQVKV VVIRESRAID YAK