Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10710 |
Symbol | |
ID | 8394962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1225304 |
End bp | 1226419 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985829 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_003143455 |
Protein GI | 257063783 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00012453 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000162574 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTGAAA CGAATGCTCA GACGATAAAG ACCCCTTCGA ACGTCATCAC GATCATCCGT ATCCTTTTGG TCCCTGTATT CGTCGTCGCC ATTCTGAGCC CTTGGCCTGA GTGGCTTCAC ATCGGCGGGG CACAGGCCTG GCAGCCGTGG GCCGCAGCAG GCATCTTCAT CCTCATTTCG GGAACGGACT GGCTGGACGG TTACCTCGCC CGCAAGCGCA ACGAGGTTAC CGACTTCGGC AAGTTCATCG ACCCGATTGC CGACAAGATT CTGGTCACGG CCGCGTTGCT GGTGCTCGTC GAGCTGGGTT CGCTGCCCAG CTGGATCGTG CTCATCATTC TGGCACGCGA GCTCATCGTT TCCGGCGTGC GCATGATCGC CGCATCCCGC GGAGAGGTCA TCGCTGCTTC TTATCTGGGC AAATTCAAGA CGGTATTCCA AATGATCGCC ATCGTGCTGT TCGTGGTGAA GGACAGCACC ATCTTCCAGG GTCAGGCATC CGTGTGGCTT ATCGTGCTGG CCTGGGTCGT TATGCTGATC GCCTTGGCGC TCACCGTCAT CTCCATGGTT GACTACTTGT CCAAGGCCCG CCACCTGATC GGCTTCAAGC CTAAGGGCGG CATCCAGATT CCCGAGGAAG AGGAGACCAT CGCCGAGCAG GTGCTGGGCG CCGCCAAGGC CAAGGGCGTC ATGGTGGGCA CTGCGGAAAG CTGCACCGGC GGCCTGATTG CCGGCACGTT GACCAGCATC CCCGGTTCTT CCGACAGCGT CGCGGGCGGC ATCGTCAGTT ATTCCAACGA CGTGAAGATG GCCCGTTTGG GAGTCTTGGC GGAAACCCTC GACACTCACG GCGCCGTCAG CGAGCAGACG GCCTGCCAGA TGGCCGAAGG CGCGCGCAAG CAGCTTGCGG TCGATGTCGC GGTGTCCGTA ACGGGCATCG CCGGACCCGG CGGGGAAGTT CCCGGCAAGC CAGTGGGCAC GGTCTGGATC GGCGTATCCA GCAAGCGCGG CACCCGCGCC GAGCTCCATC ATTTCGACGG CGACCGCGAT GCGGTCCGTT CCCAAACGGT GGATGCGGCC CTCCGCATGA TGCTGGAAGA AATCAACGCC TTCTGA
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Protein sequence | MAETNAQTIK TPSNVITIIR ILLVPVFVVA ILSPWPEWLH IGGAQAWQPW AAAGIFILIS GTDWLDGYLA RKRNEVTDFG KFIDPIADKI LVTAALLVLV ELGSLPSWIV LIILARELIV SGVRMIAASR GEVIAASYLG KFKTVFQMIA IVLFVVKDST IFQGQASVWL IVLAWVVMLI ALALTVISMV DYLSKARHLI GFKPKGGIQI PEEEETIAEQ VLGAAKAKGV MVGTAESCTG GLIAGTLTSI PGSSDSVAGG IVSYSNDVKM ARLGVLAETL DTHGAVSEQT ACQMAEGARK QLAVDVAVSV TGIAGPGGEV PGKPVGTVWI GVSSKRGTRA ELHHFDGDRD AVRSQTVDAA LRMMLEEINA F
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