Gene Shel_10710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10710 
Symbol 
ID8394962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1225304 
End bp1226419 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content62% 
IMG OID644985829 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_003143455 
Protein GI257063783 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG0558] Phosphatidylglycerophosphate synthase
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00012453 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.62574e-09 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTGAAA CGAATGCTCA GACGATAAAG ACCCCTTCGA ACGTCATCAC GATCATCCGT 
ATCCTTTTGG TCCCTGTATT CGTCGTCGCC ATTCTGAGCC CTTGGCCTGA GTGGCTTCAC
ATCGGCGGGG CACAGGCCTG GCAGCCGTGG GCCGCAGCAG GCATCTTCAT CCTCATTTCG
GGAACGGACT GGCTGGACGG TTACCTCGCC CGCAAGCGCA ACGAGGTTAC CGACTTCGGC
AAGTTCATCG ACCCGATTGC CGACAAGATT CTGGTCACGG CCGCGTTGCT GGTGCTCGTC
GAGCTGGGTT CGCTGCCCAG CTGGATCGTG CTCATCATTC TGGCACGCGA GCTCATCGTT
TCCGGCGTGC GCATGATCGC CGCATCCCGC GGAGAGGTCA TCGCTGCTTC TTATCTGGGC
AAATTCAAGA CGGTATTCCA AATGATCGCC ATCGTGCTGT TCGTGGTGAA GGACAGCACC
ATCTTCCAGG GTCAGGCATC CGTGTGGCTT ATCGTGCTGG CCTGGGTCGT TATGCTGATC
GCCTTGGCGC TCACCGTCAT CTCCATGGTT GACTACTTGT CCAAGGCCCG CCACCTGATC
GGCTTCAAGC CTAAGGGCGG CATCCAGATT CCCGAGGAAG AGGAGACCAT CGCCGAGCAG
GTGCTGGGCG CCGCCAAGGC CAAGGGCGTC ATGGTGGGCA CTGCGGAAAG CTGCACCGGC
GGCCTGATTG CCGGCACGTT GACCAGCATC CCCGGTTCTT CCGACAGCGT CGCGGGCGGC
ATCGTCAGTT ATTCCAACGA CGTGAAGATG GCCCGTTTGG GAGTCTTGGC GGAAACCCTC
GACACTCACG GCGCCGTCAG CGAGCAGACG GCCTGCCAGA TGGCCGAAGG CGCGCGCAAG
CAGCTTGCGG TCGATGTCGC GGTGTCCGTA ACGGGCATCG CCGGACCCGG CGGGGAAGTT
CCCGGCAAGC CAGTGGGCAC GGTCTGGATC GGCGTATCCA GCAAGCGCGG CACCCGCGCC
GAGCTCCATC ATTTCGACGG CGACCGCGAT GCGGTCCGTT CCCAAACGGT GGATGCGGCC
CTCCGCATGA TGCTGGAAGA AATCAACGCC TTCTGA
 
Protein sequence
MAETNAQTIK TPSNVITIIR ILLVPVFVVA ILSPWPEWLH IGGAQAWQPW AAAGIFILIS 
GTDWLDGYLA RKRNEVTDFG KFIDPIADKI LVTAALLVLV ELGSLPSWIV LIILARELIV
SGVRMIAASR GEVIAASYLG KFKTVFQMIA IVLFVVKDST IFQGQASVWL IVLAWVVMLI
ALALTVISMV DYLSKARHLI GFKPKGGIQI PEEEETIAEQ VLGAAKAKGV MVGTAESCTG
GLIAGTLTSI PGSSDSVAGG IVSYSNDVKM ARLGVLAETL DTHGAVSEQT ACQMAEGARK
QLAVDVAVSV TGIAGPGGEV PGKPVGTVWI GVSSKRGTRA ELHHFDGDRD AVRSQTVDAA
LRMMLEEINA F