Gene Shel_10510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10510 
Symbol 
ID8394942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1196978 
End bp1197463 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID644985809 
Productribonuclease HI 
Protein accessionYP_003143435 
Protein GI257063763 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000169175 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATGTTG AGATTTATAG CGACGGGTCG TCGCGCGGCA ATCCAGGTCC CGGCGGGTAC 
GGGTCGGTTC TGCACTACAC GGACGCCCAG GGCCAGCTGC ATGTGAAGGA GCTTTCGCAG
GGGTTCGTGA CCACGACCAA CAACCGCATG GAGCTTTTGG GCGTCATCGT GGCCCTTGAG
GCGCTGAAGC GGCCCTGCTC TGTGGATGTG TATTCTGACT CGCAATACGT GGTGAAGGCT
TTCAACGACC ACTGGATCGA CGGCTGGTTG AAGCGCGGAT GGAAGAACTC AAAAAAGGAA
CGCGTGAAGA ACCAGGACCT TTGGCGGCGT TTGCTGGCTG CCAAAGCGCC GCATCAGGTG
TCTTTCCATT GGGTGAAGGG CCATGCGGGG CATCCTGAGA ACGAACGGTG CGACCAGCTT
GCCACCGAGG CCGCCGACGG TTCGGGTCTG ATTCTCGACG AGGGCTTCAC CTCCGAAGAC
GTTTAG
 
Protein sequence
MHVEIYSDGS SRGNPGPGGY GSVLHYTDAQ GQLHVKELSQ GFVTTTNNRM ELLGVIVALE 
ALKRPCSVDV YSDSQYVVKA FNDHWIDGWL KRGWKNSKKE RVKNQDLWRR LLAAKAPHQV
SFHWVKGHAG HPENERCDQL ATEAADGSGL ILDEGFTSED V