Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10510 |
Symbol | |
ID | 8394942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1196978 |
End bp | 1197463 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985809 |
Product | ribonuclease HI |
Protein accession | YP_003143435 |
Protein GI | 257063763 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000169175 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATGTTG AGATTTATAG CGACGGGTCG TCGCGCGGCA ATCCAGGTCC CGGCGGGTAC GGGTCGGTTC TGCACTACAC GGACGCCCAG GGCCAGCTGC ATGTGAAGGA GCTTTCGCAG GGGTTCGTGA CCACGACCAA CAACCGCATG GAGCTTTTGG GCGTCATCGT GGCCCTTGAG GCGCTGAAGC GGCCCTGCTC TGTGGATGTG TATTCTGACT CGCAATACGT GGTGAAGGCT TTCAACGACC ACTGGATCGA CGGCTGGTTG AAGCGCGGAT GGAAGAACTC AAAAAAGGAA CGCGTGAAGA ACCAGGACCT TTGGCGGCGT TTGCTGGCTG CCAAAGCGCC GCATCAGGTG TCTTTCCATT GGGTGAAGGG CCATGCGGGG CATCCTGAGA ACGAACGGTG CGACCAGCTT GCCACCGAGG CCGCCGACGG TTCGGGTCTG ATTCTCGACG AGGGCTTCAC CTCCGAAGAC GTTTAG
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Protein sequence | MHVEIYSDGS SRGNPGPGGY GSVLHYTDAQ GQLHVKELSQ GFVTTTNNRM ELLGVIVALE ALKRPCSVDV YSDSQYVVKA FNDHWIDGWL KRGWKNSKKE RVKNQDLWRR LLAAKAPHQV SFHWVKGHAG HPENERCDQL ATEAADGSGL ILDEGFTSED V
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