Gene Shel_10460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10460 
Symbol 
ID8394937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1192142 
End bp1192624 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content56% 
IMG OID644985804 
Productsortase-like acyltransferase 
Protein accessionYP_003143430 
Protein GI257063758 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.81082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000159699 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAGG TTCGGGCTTA TACGCAAGAA GATGTGGCCG GGATGGTCGA AGTGTGGAAC 
GAAGTCGTGG ATGCAGGCAT TTCGTTTCCT CAGGAAAAAG GCCTGACGGT AGAAGAAGGG
GCCGCTTTCT TCGGCGAGCA GACGCATTGC GCCGTTGCCG TGGAAGACGG GGTTGTTCTC
GGGCTCTACA TTCTGCATCC CAACAACGTC GGACGCTGCG GTCATATCGC CAATTCAAGC
TATGCTGTAC GTGCGAATCG GCGTGGAAAA GGCATCGGGC GAATGCTCGT GTCTGACTCT
TTGAGGATGG GGCGCGAATG CGGATTCCGT ATTTTGCAGT TCAACGCCGT GGTAGCCACG
AATGCGGGCG CCCGTCATCT GTATGAGAGT CTGGGCTTCA AGCAACTGGG CACGATTCCG
GGAGGCTTCC ACATGCCGGA CGGTAGCTAC GAGGACATCT GCCCGTACTA TCACGAGTTG
TAA
 
Protein sequence
MIEVRAYTQE DVAGMVEVWN EVVDAGISFP QEKGLTVEEG AAFFGEQTHC AVAVEDGVVL 
GLYILHPNNV GRCGHIANSS YAVRANRRGK GIGRMLVSDS LRMGRECGFR ILQFNAVVAT
NAGARHLYES LGFKQLGTIP GGFHMPDGSY EDICPYYHEL