| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10450 |
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| Symbol | |
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| ID | 8394936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1189169 |
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| End bp | 1192051 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644985803 |
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| Product | Excinuclease ABC subunit A |
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| Protein accession | YP_003143429 |
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| Protein GI | 257063757 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0436929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000651145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTTTGG CAAGCGAGAA CATCGTTATT CGCGGAGCCC GTGAACATAA TCTAAAAAAC
GTCGATGTGG ACATTCCTCG TGACAAGCTT GTGGTCATCA CTGGCTTGTC CGGAAGCGGA
AAGTCCAGCC TTGCGTTCGA TACCATCTTT GCTGAGGGAC AACGCCGATA CGTGGAAAGC
CTTTCTTCGT ATGCACGCCA ATTCTTGGGC CAGATGGACA AGCCCGATTT GGATCGTATT
GACGGGCTGT CGCCCGCTGT CGCCATCGAC CAGAAAACCA CTTCTCGAAA TCCCAGGTCG
ACGGTGGGCA CGACGACGGA GATCTACGAC TACCTGCGTC TTCTGTACGC CCGCATCGGC
ATTCCGCATT GTCCTGAGTG CGGTCGAGAG ATTCGTAAGC GCACCACTGA TCAGGTTGCC
GACGAGGTTT TGGAGCTGGG TGAGGGCAAG CGCGTCCTCA TCCTTGCTCC TGTTGTCGTG
GGTCGTAAGG GCGAGCACAC GAAAGTTTTC GAGGACCTTC AGAAAGAGGG ATTCTCGCGT
GTACGCATCG ACGGAGAGGT CCAGCGACTT GACGGCACGC CTATAAAGCT CGACAAAAAG
TTCAAGCACA CCATCGATGT CGTCGTCGAC CGCATCGTGC TGAAGGATTC TGCCATCGGA
CGTATCGCCG AGTCGATTGA AACAGCAACC AAGCTTGCGG ATGGCCGAGT CGTCGTGCAT
GTCATCGACG AAGAGGATGC TGCTGCCGAT GCACAGAAGA GCACCCCTGG TTTTTCGACC
ATGTCTGCCG CCGATCATTT CTACTCTCTG GCGTTGGCGT GCCCTGAGCA CGGTCACTCC
ATGGATGAGC TTCAACCTCG TGATTTCAGC TTCAATGCTC CTTACGGTGC TTGTCCGGAC
TGCTCTGGCC TCGGCAGCAG GGAAGAGGTC GACCCCAGCC TGATGATTCC CGACCCCTCG
CTGTCTTTGA GCCAGGGCGC CATCGCGCCT TTCGTGTCGG GCAACTACTA CCCCCAGGTC
TTGGCGGCGG TGTGCAAACA TATGGGACAA GACGTGGACA CTCCTTGGGA GGATCTGCCC
AAAAAGACGC AGAACGCTCT GCTGTTCGGT CTCAAAGGCG AAAAGGTCCG CGTCGATTAC
CGTACCGTGG ATGGCAGGGA GACATATTGG TTCATCGATT GGACGGGCGC CATCGATGCG
GTCATGCAAA GGTACCGCGA TGCCCAGTCC GACGCCCAGC GCGAGAAATA CGGAAAGTAC
TTTGCCACCA TTCCTTGTGC GACCTGCGGT GGAAAGCGCC TGAAACCCGA GATTCTCGCG
GTTACCGTCG GCGGCAAGAG CATCGACCAG GTTTGTGAGA TGAGCGCCGT CGAATGCCTT
GACTTCTTCA ACGGAATCGC GCTTTCCGAG CGAGAGGCCG TCATCGCCAC GGCCATCGTC
AAAGAGATTC GAGCTCGTCT GCGGTTCTTG GTGGATGTGG GGTTGGACTA CCTCACCCTT
GAGCGCGCAA CGGCCAGCCT ATCGGGTGGC GAGGCCCAAC GCATCCGTCT TGCTACGCAG
ATCGGGGCAG GCCTCATGGG GGTTCTCTAC ATCCTGGACG AACCCTCCAT CGGACTGCAT
CAACGTGACA ACGAGCGGCT TATCGCCACG TTGGAGCGCC TACGTGATTT GGGCAACACG
GTTATCGTCG TCGAGCATGA CGAGGACACC ATCCGTTCTG CGGATTACGT CATCGACATG
GGCCCTGGCG CAGGCGAGAA AGGCGGTTAT CTGGTTTCGG CGGGAACGCC CGAGGAGGTT
GCCGCATGTG AGAAGAGCAT TACAGGTGCA TATTTGCGTC GTGACAGCGT TATTGAAGTG
CCGAAAAAGC GCCGCAATCC GAAACGCGGC TCCATCAAAC TGGCGGGCGC CAAGGAGAAC
AACCTCAAGA ATGTGACGAT CGATATCGAA ATCGGAACGT TCACCGTGGT CACGGGCGTG
TCTGGAAGCG GCAAGAGCTC GCTTATCACC GATACGCTGG CCCCTGCCTT GGCAAACCGT
CTTAATCATG CCCATAAGCG CACGGGCGCG TACCGCAAGC TCAGCGGCTA TGAGGAGCTG
GACAAGATTA TCGATATCGA CCAGAGTCCC ATCGGGCGTA CGCCCAGGTC GAATCCGGCG
ACGTACATCG GTCTTTGGGA TGACATCCGC GCGTTGTTCG CCTCGACGCC CGAGGCGAAG
GCCCGCGGCT ATGCCCCTGG CCGGTTCAGC TTCAACGTGA GCGGCGGCCG GTGCGAGGCA
TGCAAGGGTG ATGGCCAGCT TAAGATAGAA ATGCATTTCC TGCCTGATGT ATACGTGCCA
TGCGAAGTAT GCGGTGGTAA ACGCTACAAC CGCGAAACGC TTCAGGTGAC GTATCGCGGC
AAGAACGTTT ACGACGTGCT CGATATGACG GTGGATGAGG CCTTGGAATT CTTCAAGAAC
ATTCCCGGCC TGTCCCGTAA GCTGCAGACG CTGCATGATG TGGGTCTCGG CTACATTCGC
CTCGGACAGC CTGCCACCAC GCTTTCGGGC GGCGAGGCGC AACGCGTGAA GCTCGCAAGC
GAACTTCAGC GCCGTCAGTC GGGCAAGACT ATCTACGTGC TGGACGAGCC CACGACCGGT
TTGCACATGG AAGATGTTAA ACAGTTGCTC GAGGTGCTTC AACGCCTGGT CGACTGCGGC
AACACCATGC TGGTAATCGA GCACAACCTC GATGTGATCA AGTCTGCCGA CCGAGTTATC
GACTTGGGTC CCGAAGGCGG CGACCGCGGC GGTACTGTGG TGGCCAAGGG CACGCCTGAA
AAGGTCGCCA ACAACGAAAA CAGTCATACA GGCAGGTTCT TGAGGTCTGT GCTTGGAATG
TAA
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| Protein sequence | MVLASENIVI RGAREHNLKN VDVDIPRDKL VVITGLSGSG KSSLAFDTIF AEGQRRYVES
LSSYARQFLG QMDKPDLDRI DGLSPAVAID QKTTSRNPRS TVGTTTEIYD YLRLLYARIG
IPHCPECGRE IRKRTTDQVA DEVLELGEGK RVLILAPVVV GRKGEHTKVF EDLQKEGFSR
VRIDGEVQRL DGTPIKLDKK FKHTIDVVVD RIVLKDSAIG RIAESIETAT KLADGRVVVH
VIDEEDAAAD AQKSTPGFST MSAADHFYSL ALACPEHGHS MDELQPRDFS FNAPYGACPD
CSGLGSREEV DPSLMIPDPS LSLSQGAIAP FVSGNYYPQV LAAVCKHMGQ DVDTPWEDLP
KKTQNALLFG LKGEKVRVDY RTVDGRETYW FIDWTGAIDA VMQRYRDAQS DAQREKYGKY
FATIPCATCG GKRLKPEILA VTVGGKSIDQ VCEMSAVECL DFFNGIALSE REAVIATAIV
KEIRARLRFL VDVGLDYLTL ERATASLSGG EAQRIRLATQ IGAGLMGVLY ILDEPSIGLH
QRDNERLIAT LERLRDLGNT VIVVEHDEDT IRSADYVIDM GPGAGEKGGY LVSAGTPEEV
AACEKSITGA YLRRDSVIEV PKKRRNPKRG SIKLAGAKEN NLKNVTIDIE IGTFTVVTGV
SGSGKSSLIT DTLAPALANR LNHAHKRTGA YRKLSGYEEL DKIIDIDQSP IGRTPRSNPA
TYIGLWDDIR ALFASTPEAK ARGYAPGRFS FNVSGGRCEA CKGDGQLKIE MHFLPDVYVP
CEVCGGKRYN RETLQVTYRG KNVYDVLDMT VDEALEFFKN IPGLSRKLQT LHDVGLGYIR
LGQPATTLSG GEAQRVKLAS ELQRRQSGKT IYVLDEPTTG LHMEDVKQLL EVLQRLVDCG
NTMLVIEHNL DVIKSADRVI DLGPEGGDRG GTVVAKGTPE KVANNENSHT GRFLRSVLGM
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