| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10430 |
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| Symbol | |
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| ID | 8394934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1187107 |
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| End bp | 1188048 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644985801 |
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| Product | site-specific recombinase XerD |
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| Protein accession | YP_003143427 |
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| Protein GI | 257063755 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00129547 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000966981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCTGATG TCGATGCTGC CCGGAGCGAA GCCGACCTCG CCATTGACGA CGTATATCTC
AAACATGTCG ATGATTATTG TCTCGAGATG GCCCAGGTCA AGAATGCATC GGCCCATACT
GTGCGAAATT ACCGGATCGA CCTGCTTGAT TTCGGCAGGT GGGCTGTGCG CTGCCATGTG
GATCCCATGC GTATCACCTA TAGGCAGGTG CGCCGCTACC TCGGCGAGCT GACGCAGGCG
CAGTATTCCC GCAAAACCAT CAACAGAAGG CTTTCAGCCA TAAAAGGGCT GTTCAGATGG
ATGAATCTGA CGGGTGTCAT CGATTCTGAC CCCGTAAGCG TTATCCAAGG CCCGAAGTCC
GCCAAAGGAC TCCCCAGAAT GATTCCCGCA TCCGATATGG GCAGGATTCT CACGGTATAC
AAAGACAGCG ACGACCCGGC CGACATGCGC AATCAGGCTA TCCTCGAGTT CCTGTACGCC
TGCGGAGCCC GTATATCCGA GGCCTCGGGG CTCATGCTTG CTGATGTGGA TTTCGACGCT
AAGCAGGTGA AGGTATTCGG CAAGGGGAGC AAGGAGAGGA TTATTCCCCT GCACGACATG
GCGGTTAAAA CCATGAAATC CTATGCGTGG CGCGCCCGCC CTGTTCTGTT GAAGGGAAAG
CCCAACGAGT TCTTTTTCGT GTCGACCCGG GGAAATCGCA TGGGTCCGGA CGCTATGCGC
AAAATGTTCA AGAACACCCT GATCATGGCA GGGGTCGACA CATCGTATAC GCCCCACGAC
ATGCGGCATA CTTTCGCCAC CGACCTGGTC GAAGGGGGAG CGGACTTGAA AAGCGTCCAG
GAGATGCTTG GTCACGAGAG CCTTTCGACG ACGCAGATCT ACACGCATCT GTCGGTCGAC
CATTTGAAGC AGGCCGTCCA TCAGGCTCAT CCCCGCGGAT AA
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| Protein sequence | MSDVDAARSE ADLAIDDVYL KHVDDYCLEM AQVKNASAHT VRNYRIDLLD FGRWAVRCHV
DPMRITYRQV RRYLGELTQA QYSRKTINRR LSAIKGLFRW MNLTGVIDSD PVSVIQGPKS
AKGLPRMIPA SDMGRILTVY KDSDDPADMR NQAILEFLYA CGARISEASG LMLADVDFDA
KQVKVFGKGS KERIIPLHDM AVKTMKSYAW RARPVLLKGK PNEFFFVSTR GNRMGPDAMR
KMFKNTLIMA GVDTSYTPHD MRHTFATDLV EGGADLKSVQ EMLGHESLST TQIYTHLSVD
HLKQAVHQAH PRG
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