Gene Shel_10400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10400 
Symbol 
ID8394931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1183256 
End bp1184749 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content62% 
IMG OID644985798 
ProductMg chelatase-related protein 
Protein accessionYP_003143424 
Protein GI257063752 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000714945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000192008 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAGCGCC GCTGTTCGGT GCAGTCCGCC GCGCTGGTGG GCGTCGAGGC CATTCCTGTG 
CACGTGGAGG TTGTGGTCAT GAGCGGCCTG CCGGGCATCT CCATAGTCGG AATGCCCGAC
GCCGCTGTAC GCGAATCGCA GGAACGGGTG AAATCCGCAA TCAAGGCAAG CGGCTTCACC
ATGCCTGGAG ACAAGATCGT CATCAACCTG GCACCCGGAT CCATCCGAAA AACCGGGGCA
GGGTTCGACC TGCCCATCGC ATGTGCGATT CTCGGAGCCA CAGGGCAGGT GGATCCGCGG
GTCATGAGCT CGTTTCTCCT GGTGGGTGAG CTGTCTTTGG GAGGGAAGGT CCGTCCTGTG
CCCGGCACGC TGCCCTGTGC GCTGCTGGCC CGTCATCTGG GGCTGAAATT CGCGGTGCCG
GCAGATGCCG AAGACGCCGT GCCCCTGGAG GGCTTGGACC AGCGCCAGAT AAAATCCTTG
GGCGAGATGC GCTTATGCGA TTTGCTGCCC GCTCATTTCA AGGAGCCTGG TCAGGCGCCT
CCACTCTTGG ACTTCTCGGA GATCCACGGT CATGCGGCAG CCAAGCGCGC GATGCAGATC
GCATCGGCAG GAGAGCACGG CATTCTGCTC ATGGGCCCTC CCGGCTCAGG CAAGACCATG
CTGGCCCGCG CCATGCCTTC CATCCTTCCA CCTCTAAGCG AGTCGGAAGC CTTGGAGGCG
GCCGCCATCC ACTCGGTGGC CGGGGAGCCG GTCGACGGGA TTCTTGCCGG TATGAGGCCC
TTCAGAAAAC CGCATCACTC GACGAGCATG GCGGGACTTG TGGGAGGGGG AAGTCCTGTG
CGGCCTGGCG AGATATCGCT TGCCCACAAA GGGGTACTCT TTCTGGATGA GATCGCCGAA
TTCAAGCCGG CGTCGTTGCA GGCGCTGCGC CAACCCATGG AGGCCGGGTC CATCTCGGTC
ACGCGCGTCC ATGGCAATGT GGATATGCCT GCAGAGTTCA TGCTGGTGGC GGCTTCGAAC
CCGTGTCCGT GCGGCTATTA CGGCGACCCT GAGAAGCCCT GTTCCTGCAG TGAGCAGGCA
GTCAGACGAT ATCAAAACAG GATAGGCGGA CCTTTGCTGG ACCGCATAGA TATGCATGTG
GATGTGTGGC GCACCGATCC TGGAACCATT CTCAGCAGCA GCTCGGAGGA GCTGACGTCC
GCCCGTCTGC GGGAGGGCGT GATGACCGCC CGATCGTTTT CGTCATGGCG CCACGAGCAT
TTAGGGGATG CAGAACGCAC CCGCAACGTG CAAGAGCTGG TTGCGTCGTG CCGTATGACA
CCTGCCTGCC GGTCGCTGTT GGAGCTGTCG GCCAAGACCC ACCACATGTC AGGGCGTGGC
ATCTCCCGTG TGCTTGCCGT GGCGCGCACC ATAGCCGATT TGGAGGAAAG CGAAACGGTG
TCCGACGAGC ATATCCTGGA AGCTTTGGGG TTCCGCATGA GAAAGGGGGC GTGA
 
Protein sequence
MQRRCSVQSA ALVGVEAIPV HVEVVVMSGL PGISIVGMPD AAVRESQERV KSAIKASGFT 
MPGDKIVINL APGSIRKTGA GFDLPIACAI LGATGQVDPR VMSSFLLVGE LSLGGKVRPV
PGTLPCALLA RHLGLKFAVP ADAEDAVPLE GLDQRQIKSL GEMRLCDLLP AHFKEPGQAP
PLLDFSEIHG HAAAKRAMQI ASAGEHGILL MGPPGSGKTM LARAMPSILP PLSESEALEA
AAIHSVAGEP VDGILAGMRP FRKPHHSTSM AGLVGGGSPV RPGEISLAHK GVLFLDEIAE
FKPASLQALR QPMEAGSISV TRVHGNVDMP AEFMLVAASN PCPCGYYGDP EKPCSCSEQA
VRRYQNRIGG PLLDRIDMHV DVWRTDPGTI LSSSSEELTS ARLREGVMTA RSFSSWRHEH
LGDAERTRNV QELVASCRMT PACRSLLELS AKTHHMSGRG ISRVLAVART IADLEESETV
SDEHILEALG FRMRKGA