Gene Shel_10390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10390 
Symbol 
ID8394930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1182751 
End bp1183254 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content58% 
IMG OID644985797 
Productpredicted endonuclease related to Holliday junction resolvase 
Protein accessionYP_003143423 
Protein GI257063751 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000139118 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000910029 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACAACA TGGTATACGG GAAGAACCCG GACGAGCCTG CAGAGGTCGA GCCGCGCCAT 
GTGGTGACCG AAGAGGTTGA TGAGGAGTCG TTCGGAAACG ACGAACCCTT CGGTCCCTAT
CGGCTTTCGC GCGAGATGGA TCCCAAAGAG CTGGGACGCA GGGGAGAGGC CTGCGCTTGC
ATGCTGCTGG ATTACAAGGG CTACGAGATT CTTGAGCGGA ATTGGAAATG CCCGGCGGGA
GAAGCGGACA TCATCGCGAT CGATGAGAAC GGGACGCTGG TGTTCGTCGA GGTCAAAACC
AGACGAGGGG TGGAAAACGG CCTTCCTGAA GAGGCAATCG GTCGTGCCAA GCGGGCGCGG
TACGAGAAGA TTGCGGCGTA CTACCTGTCC CAGTACACGG GTCCCGATAC CGCATTGAGG
TTCGACACGA TAGCCTTGTT GGTGATGGAC AACTACCGAG CCCTGGTCAG ACATATCGTC
AACGCGTTCG GGCAGGGGGA TTAG
 
Protein sequence
MDNMVYGKNP DEPAEVEPRH VVTEEVDEES FGNDEPFGPY RLSREMDPKE LGRRGEACAC 
MLLDYKGYEI LERNWKCPAG EADIIAIDEN GTLVFVEVKT RRGVENGLPE EAIGRAKRAR
YEKIAAYYLS QYTGPDTALR FDTIALLVMD NYRALVRHIV NAFGQGD