Gene Shel_10360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_10360 
Symbol 
ID8394927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1180514 
End bp1181005 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID644985794 
Productconserved hypothetical protein TIGR00043 
Protein accessionYP_003143420 
Protein GI257063748 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000182754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000997482 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAATATCA TCGTTGATGT GCTGCATGGC GAAGACCTGG TCTCGCAGGT CGATGTGGAA 
CGTCTGGCCG AATACGTGCT GACCCAGGAG GGGTGTCCCG AAAACACCGA GGTCAGCATC
ACCTTCGTGG ATGACGAGGA GATTCAGCGG CTGAACCTCG AGTACCGGGG CATAGACAAG
CCCACTGACG TGCTGTCCTT CGAATGCGAC GGTTACGACG ACGAGTTTGA CGATGGCGAT
GCCTACGAGG ATGCGGGCGT GCCTGATGAC GAGCCGTTTT TGCTGGGGGA TATCATCATC
GCCACCGATG TGGCCAACGC CCAGACGGCG CAGTTCCACA CCACGCCTTC CGAGGAGCTC
CATGTGTTGC TGGTGCACGG GCTTCTGCAC CTCAACGGCT GGGACCATGT CCATAGTGAC
GAGGAGGCCG AAGAGATGGA GGCCCGCGAA CGCGAGCTGC TGGCGGGCTA CGGGCTGCCA
GGCATCCGAT GA
 
Protein sequence
MNIIVDVLHG EDLVSQVDVE RLAEYVLTQE GCPENTEVSI TFVDDEEIQR LNLEYRGIDK 
PTDVLSFECD GYDDEFDDGD AYEDAGVPDD EPFLLGDIII ATDVANAQTA QFHTTPSEEL
HVLLVHGLLH LNGWDHVHSD EEAEEMEARE RELLAGYGLP GIR